Chem-Bio Informatics Journal
Online ISSN : 1347-0442
Print ISSN : 1347-6297
ISSN-L : 1347-0442
Volume 5, Issue 2
Displaying 1-2 of 2 articles from this issue
Original
  • Hironori Mutoh, Nobuyuki Hamajima, Kazuo Tajima, Takeshi Kobayashi, Hi ...
    Article type: Original
    2005 Volume 5 Issue 2 Pages 15-26
    Published: 2005
    Released on J-STAGE: November 08, 2005
    JOURNAL FREE ACCESS
    Recent studies have suggested that not only genetic factors such as single nucleotides polymorphisms (SNPs) but also environmental factors such as smoking, alcohol consumption, and intake of salty food affect the development of heterogeneous diseases. Revealing the polymorphisms that may contribute to Helicobacter pylori infection as a consequence of specific environmental factors will help in developing personalized medicine. Eighty-four H. pylori infection-positive and 84 H. pylori infection-negative subjects were analyzed using the data for 37 different polymorphisms with a machine learning method—artificial neural network (ANN) with the exhaustive combination search method. The constructed ANN model for H. pylori infection exhibited greater performance than the logistic regression (LR) model. ANN modeling was also separately applied to non-smokers and smokers data sets. The result implies that the different polymorphisms can be risk factors under the influence of specific environmental factors. In addition, the result also indicated that the susceptibility to H. pylori infection can be lowered by giving up smoking even though subjects with risk factor for smokers. The reported polymorphisms that are related to H. pylori infection were automatically identified using our method, without any prior knowledge. The identified polymorphisms affected the infection when present as combinations. This method will be a useful tool for the analysis of risk factors against multifactorial diseases.
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Review
  • Jun Nakaya, Tetsuo Shimizu, Hiroshi Tanaka, Shigetaka Asano
    Article type: Review
    2005 Volume 5 Issue 2 Pages 27-38
    Published: 2005
    Released on J-STAGE: November 08, 2005
    JOURNAL FREE ACCESS
    TThis paper summarizes the current status of the Translational Research in Australia and an ideal design of Japanese National Translational Research Supporting Center (NTRSC). This summary is based on an investigative report for Australian Translational Research as a Japanese national delegate. The objective of this investigation was to elucidate basic requirements and financial basis for national translational research infrastructure. The investigation was carried out through previous information exchange, having discussion with representatives of major Australian facilities, and field studies as a Japanese national delegate. We discussed the details with representatives of each facilities having pre-collected information of both parties. The Australian definition of translational research was clear and reasonable than the Japanese one. The Australian infrastructure for translational research was constructed with care and works effectively. This paper elucidates the important features of the ideal infrastructure for translational research facilities. With these considerations in mind, this paper discusses an ideal infrastructural design of Japanese NTRSC.
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