2014 年 13 巻 6 号 p. 299-300
We have developed a mapping pipe line for RNA-seq data analysis. In the mapping pipe line, we combined Bowtie and TopHat to handle splicing and improve the number of unique reads. Furthermore, we have proposed a novel algorithm to define annotation of non-coding RNA, and we have developed a data processing program using a novel algorithm. Additionally, in order to find new functional genes, we have developed an analysis program for RNA expression in the intergenic region.