Homologues of proliferating cell nuclear antigen gene (
pcna) were identified and characterized in
Hyphantria cunea nucleopolyhedrovirus (HycuNPV), and two cell lines, NSC-HyCu15B and Sf9, from the fall Webworm,
H. cunea, and the fall armyworm,
Spodoptera frugiperda, respectively. The structure of PCNAs from NPVs and their host cells was comparatively analyzed. The HycuNPV
pcna homologue had an open reading frame (ORF) encoding a polypeptide of 250 amino acid residues with a predicted molecular weight (MW) of 27, 080, and shared 34 and 64% amino acid sequence identities with PCNAs of
Autographa californica MNPV and
Orgyia pseudotsugata MNPV, respectively, suggesting a high degree of divergence within NPV PCNAs. Analyses of
pcna cDNAs from NSC-HyCu15B and Sf9 cells showed that both cDNAs encoded polypeptides of 260 amino acid residues with MWs of 28, 968 and 29, 001, respectively. The NSC-HyCu15B and Sf9 cell PCNAs shared a very high degree of amino acid sequence identities not only within lepidopteran PCNAs (96-98%), but also between lepidopteran and dipteran PCNAs (78-80%). Multiple alignments of PCNAs from representative organisms revealed that NPV PCNAs shared higher identities with PCNAs from insects (30-45%) and other eukaryotes (26-42%), and lower identities with PCNAs from archaea (13-23%) and
Paramecium bursaria chlorella virus 1 (15-25%). No significant closer relationship was observed in the amino acid sequence identities between PCNAs from HycuNPV and
H. cunea from which HycuNPV was primarily derived. In addition, multiple alignment revealed that similarly to archaea PCNAs, NPV PCNAs possessed a unique gap around the region that was important for eukaryotic PCNAs to interact with DNA polymerase ε. Circumstantial evidence suggested that baculovirus
pcna homologues had descended from a common ancestor that was derived by a certain NPV after the split to groups I and II.
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