We studied the degradation and fragmentation of DNA molecules of corn during different food production processes. Grits prepared from the genetically modified (GM) corn varieties MON810 and GA21 were processed by frying or using an extruder, a device that treats a slurry of grits with both heating and pressure, followed by a sudden release of pressure to atmospheric conditions through a pinhole, to produce corn snacks. DNA fragments longer than 600 bp could be amplified by PCR for the genomic DNA prepared from fried processed corn grits at temperatures lower than 160℃ for 1 min, while those shorter than 400 bp could be detected from processed grits at 180℃. However, even at 128℃, extruder processing caused severe fragmentation of genomic DNA fragments shorter than 197 bp, and at much higher temperatures no amplified fragments longer than 100 bp could be detected. Grits derived from the GM corn varieties MON810 and GA21 were processed with an extruder at 128℃, and genomic DNAs were prepared from the processed grits. Each transgene of these GM corns and the cornstarch synthase lib (
SSIIb) gene, which is used as the control gene for the Japanese official quantification method, were quantified by quantitative TaqMan PCR. The copy number of the
SSIIb gene in the processed grits was smaller than that of the transgenes of both MON810 and GA21, which indicated that the
SSIIb gene would be easier to fragment than the transgenes with extruder processing. Therefore, the ratio of the copy number of the transgene per internal control SSIIb gene in the processed corn snacks using the extruder might be higher than in the raw materials of corn grits using quantitative TaqMan methods.
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