Antibodies are indisputably the most successful reagents in molecular-targeting therapy. However, use of antibodies has been limited due to the biophysical properties and the cost to manufacture. To enable new applications where antibodies show some limitations, we have developed an alternative-binding molecule with non-immunoglobulin domain. The molecule is a helix-loop-helix peptide, which is stable against enzyme degradations in vivo and is too small to be non-immunogenic. Here, we introduce the molecular-targeting peptides termed “microantibodes” that show antibody-like functions, high affinity and high specificity for the targeted proteins. Since the helix-loop-helix peptide folds by virtue of the interactions between the amino acid residues positioned inside the molecule, the outside solvent-exposed residues are possible to be mutated with a variety of amino acids to give a library of the helix-loop-helix peptides. Based on our technology of phage-displayed libraries for antibodies, we constructed a phage-displayed library of “microantibodes”. The library was screened against granulocyte colony stimulating factor (G-CSF) receptor, and the screened peptide was cyclized by a thioether linkage into the N- and C-termini. The cyclic peptide showed a strong binding affinity (Kd of 4 nM) to the receptor and a long half-life (>2 weeks) in mouse sera, proving an enzyme-resistant property. Furthermore, immunization of the peptide to mice showed no induction of the antibody titer (non-immunogenic). We have applied our peptide libraries for VEGF, hIgG/Fc, interleukins, and kinases to obtain their molecular-targeting peptides “microAntibodies”.
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