Phylogenetic relationships of Lyophyllum section Difformia were inferred using internal transcribed spacer (ITS) and large sub-unit (LSU) sequence data of specimens from Fennoscandia and Japan. Sequence analyses show that the delicacy mushroom Lyophyllum shimeji, hitherto only known from East Asia, occurs in Fennoscandia and that it is confined to Scots pine forests on lichen-clad sandy soil. Also, Lyophyllum decastes and L. fumosum, two species described from Europe, have a wide distribution and are represented in Japan. Within both these species sequence variation indicates that more taxa should be recognized. The observed phylogenetic differences correlate strongly with habitat, conifer or deciduous forest, but also to some extent with geographic origin. The identity of the species Lyophyllum loricatum remains unclear and further sequences from specimens fitting the original description are needed to resolve its taxonomic status. The phylogenetic results suggest that ecology is an important character when discriminating between species in Lyophyllum section Difformia.

Aflatoxin (AF) contamination was determined in 40 chili samples, representing 3 varieties from Punjab, Pakistan, by HPLC with fluorescence detection. Total AF were determined in varieties Longi (n = 15), Wonder hot (n = 12), and Skyline 1 (n = 13), and the concentrations were high in some samples. AF were detected in 9 (60%), 8 (67%), and 7 (54%) of Longi, Wonder hot, and Skyline 1 samples, respectively; concentration ranged from 4.7 to 34.6, 1.0 to 14.3, and 7.8 to 15.6 lg/kg, respectively. The percentage of samples greater than the European Union statutory limit for AFB1 and total AF in spices were 53% and 53%, 53% and 8%, and 53% and 38% for Longi, Wonder hot, and Skyline 1, respectively. Significant differences at α < 0.05 between mean concentration of AF in Longi (15.9 ± 0.6 lg/kg) and Wonder hot (5.8 ± 0.3 lg/ kg) were determined. In conclusion, choosing the variety demonstrating the lowest AF concentration from various chili samples will assist in improving product quality. This preferred variety is Wonder Hot as described herein.

Effects of pH, NH4-N, and temperature on basidiospore germination in Coprinopsis austrophlyctidospora from New Zealand, C. phlyctidospora from Japan, C. aff. rugosobispora from Canada, and C. echinospora from Canada were investigated. The Coprinopsis spp. required the presence of ammonium-nitrogen under weak alkaline to neutral conditions for germination, regardless of their different areas of occurrence. The former two species had a wider concentration of NH₄Cl solution and pH range for germination in comparison to the latter two species. The optimum concentration of NH₄Cl solution for the germination was 0.01 M in C. austrophlyctidospora and 0.1 M in the other three species. The pH optimum for germination in the former two species was 8.0 whereas that for germination in the latter two species was 8.0–8.5. The temperature range (5.0–40.0°C) for the former two species was wider than that (5–30°C) for the latter two species. Temperature optima for the germination in the former two species, C. aff. rugosobispora and C. echinospora, were 30, 20–25 and 15°C, respectively. The germination abilities of these Coprinopsis species in a wide range of temperatures are relevant to their natural temperature regime, showing their potential ability to propagate in tropical to subarctic regions.

Three species of Agaricales and Boletales are fully described and illustrated from Japan: (1) Clitopilus vernalis sp. nov. produces collybioid basidiomata with pruinose, greyish-yellow pileus and stipe, obscurely undulate basidiospores, and has a lignicolous habit fruiting in spring on dead decorticated logs of Pinus densiflora; (2) Favolaschia gelatina sp. nov. (section Anechinus subsection Rubrinae) has pleurotoid, astipitate basidiomata with transparent, elastic, jelly-like flesh, and truly poroid hymenophore; (3) Boletellus betula is a new record for Japan, growing in Quercus crispula and Pinus densiflora forests.

A taxonomic study based on morphological and phylogenetic characters revealed that the specimens referred to as ‘Polyporus pseudobetulinus’ in Japan actually represent two distinct species, namely, P. pseudobetulinus and P. subvarius. These cam be distinguished by characteristics of the pileus surface, the presence/absence of clamp-connections on generative hyphae, and the shape of the basidiospores. P. subvarius is newly reported from Japan following the original description from China. The phylogenetic positions, detailed descriptions, and illustrations are provided for both species.

The dependence of fungal decomposition of leaf litter on incubation temperature and litter types used as substrata was assessed under pure culture conditions. Isolates of Xylaria sp., a major ligninolytic fungus in cool temperate forests in Japan, were used as the fungal material. Xylaria sp. is mesophilic; maximum growth and decomposition occurred at 25°C. In the temperature test, the decomposition pattern of beech leaf litter by three isolates of Xylaria sp. changed at a threshold at 25°C. Cellulolytic activity increased with temperature from 5 to 25°C, whereas above 25°C ligninolytic activity increased at the expense of cellulolytic activity, leading to suppressed overall decomposition as a result of the higher temperature. The mass loss of leaf litter caused at 20°C by an isolate of Xylaria sp. was variable among 15 litter types and was correlated negatively with acid-unhydrolyzable residue (AUR) content and positively with total carbohydrate content for the 15 litter types. The effects of temperature and litter type on the growth and decomposition of leaf litter by Xylaria sp. may have implications for changes in fungal decomposition of leaf litter that would be predicted in response to future environmental changes

The glyceraldehyde-3-phosphate dehydrogenase (gpd) gene was cloned from the violet root rot fungus, Helicobasidium mompa, and characterized. Only one copy of the gene was present in the genome of H. mompa. The H. mompa gpd gene was found to encode a protein of 335 amino acids and its putative protein showed high homology with GPD protein from other heterobasidiomycetes. Although the promoter region contains a TATA box and several common motifs, these sequence positions were very different from that of other basidiomycetes. Moreover, mRNA expression showed that the gpd gene was transcribed constitutively in H. mompa.

A new monoverticillate Penicillium species (subgenus Aspergilloides Dierckx), Penicillium viticola, was isolated from a grape cultivated in Yamanashi Prefecture, Japan. Morphologically, P. viticola is characterized by the production of slightly roughened conidia, slightly roughened stipes, and rapid growth on 25% glycerol nitrate agar (G25N). This species is phylogenetically close to Penicillium angulare S.W. Peterson, E.M. Bayer & Wicklow, but differs with respect to colonial characteristics and conidia and penicilli morphology.

A simple procedure is reported for transformation of the rice false smut fungus Villosiclava virens (anamorph: Ustilaginoidea virens) using electroporation of intact conidial cells. The transformation vector pCB1004eGFP was constructed with a green fluorescent protein (eGFP) gene under a constitutive promoter of the glyceraldehyde-3-phosphate dehydrogenase gene of Cochliobolus heterostrophus.When a linearized vectorwas applied, eGFP-expressing transformants were successfully acquired. An inoculation test in rice plants showed that the eGFP-expressing transformants were able to form rice false smut balls.

The causal fungus of Ceratocystis canker of fig in Japan is described as Ceratocystis ficicola sp. nov. This species is characterized by galeated ascospores and is similar to Ceratocystis fimbriata sensu lato. However, the perithecia of the new species are much larger than those of C. fimbriata. The fungus grows more rapidly than C. fimbriata sensu stricto at 25°C but more slowly at 30°C. Molecular analysis of the nucleotide sequences of rDNA ITS regions showed that C. ficicola is phylogenetically placed in the clade of C. fimbriata s. l. but is easily distinguishable from other species of C. fimbriata s. l.

Adding a overlayer of liquid paraffin to formalin and subsequently removing it with oil-absorbent sheets in order to observe the specimen are very useful procedures when handling specimens preserved in formalin.

In Candida albicans, alcohol metabolism is implicated in biofilm formation. The alcohol dehydrogenase gene (ADH1) is involved in the conversion of acetaldehyde to ethanol and reported to be downregulated during biofilm formation. C. albicans produces acetaldehyde under both in vivo and in vitro conditions. Mutations in ADH genes result in increased acetaldehyde production in vitro, but studies are lacking on the morphogenetic role(s) of acetaldehyde in C. albicans. We report here that acetaldehyde at a concentration of 7 mM was able to inhibit the conversion from yeast to hyphal forms induced by four standard inducers at 37°C. The hyphal inhibitory concentrations did not adversely affect the growth and viability of C. albicans cells. The same concentration of acetaldehyde also significantly inhibited biofilm development, and only adhered yeast cells were found. We hypothesize that acetaldehyde produced by C. albicans may exert a morphogenetic regulatory role influencing yeast-to-hypha conversion, biofilm formation, dissemination and establishment of infection.