This study tested the effect of environment-friendly farming on the egret (
Aldea cinerea,
A. alba,
Egretta intermedia, and
E. garzetta) population, which served as an indicator of biodiversity in rice fields. The study sites were located in Yasu and Takashima, Shiga Prefecture, and Toyota, Aichi Prefecture, Japan. We investigated the abundance of egrets and their diets in rice fields under 1) conventional, 2) low-input, and 3) organic farming systems from 2014 to 2016. We also compared the abundance of egrets and their diet between rice fields with and without fish ladders in 2016. There were more egrets and fish in the organic rice fields than in the conventional ones, whereas the number of tadpoles did not differ significantly. In organic fields, the number of egrets increased because there were more fish (mainly loaches) than in conventional fields subject to crop rotation and agrochemicals use. The fish ladder increased the numbers of fish,
Aldea alba, and
Egretta intermedia, reduced the number of tadpoles, and did not affect
Aldea cinerea.
A. cinerea may not prey on the increased numbers of small juvenile fish in rice fields with fish ladders.
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