Chem-Bio Informatics Journal
Online ISSN : 1347-0442
Print ISSN : 1347-6297
ISSN-L : 1347-0442
3D Structure Based Atomic Charge Calculation for Molecular Mechanics and Molecular Dynamics Simulations
Tatsuya NakanoTsuguchika KaminumaMasami UebayasiYoshiro Nakata
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2001 Volume 1 Issue 1 Pages 35-40

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Abstract
We propose a new charge equilibration approach that depends upon molecular 3D structure. Nishimoto - Mataga equation is used to express the shielding effect. With the present approach, it is not necessary to iterate simultaneous equations for evaluating charge equilibration, although that is required in the Qeq method. Atomic charge calculations were carried out for several organic molecules. Calculated charge distributions are in good agreement with experimental values.
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2001 Chem-Bio Informatics Society
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