Genome Informatics
Online ISSN : 2185-842X
Print ISSN : 0919-9454
ISSN-L : 0919-9454
Construction of Genetic Network Using Evolutionary Algorithm and Combined Fitness Function
Shin AndoHitoshi Iba
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2003 Volume 14 Pages 94-103

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Abstract
This paper proposes a method to capture the dynamics in gene expression data using S-system formalism and construct genetic network models. Our purposed method exploits the probabilistic heuristic search and divide-and-conquer approach to estimate the network structure. In evaluating the network structure, we attempt a primitive integration of other knowledge to the statistical criterion. The Z-score is used to analyze the robust and significant parameters from stochastic search results. We evaluated the proposed method on artificially generated data and E. coli mRNA expression data.
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© Japanese Society for Bioinformatics
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