Genome Informatics
Online ISSN : 2185-842X
Print ISSN : 0919-9454
ISSN-L : 0919-9454
The Repertoire of Desaturases for Unsaturated Fatty Acid Synthesis in 397 Genomes
Kosuke HashimotoAkiyasu C. YoshizawaKoichi SaitoTakuji YamadaMinoru Kanehisa
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2006 Volume 17 Issue 1 Pages 173-183

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Abstract

Fatty acids are the major components of membrane molecules. The fact that unsaturated fattyacids play multiple important roles, physically and biologically, means that the ratio of unsaturatedto saturated fatty acids in the membrane needs to be strictly regulated to maintain cellular homeostasis.The most ubiquitous and widespread modification to fatty acids, which results in a greatdiversity of different structures, is the insertion of double bonds. Fatty acid desaturases directlyintroduce regioselective double bonds into fatty acids. A phylogenetic analysis of desaturases suggeststhat the sequences of these proteins include a highly conserved domain, which determines thedifferences in specificity and regioselectivity found in these enzymes. In this study, we performeda systematic analysis of fatty acid desaturases found in the genomic data of 397 organisms. Weobtained a set of desaturases clustered by regioselectivity using a hierarchal clustering analysis.

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© Japanese Society for Bioinformatics
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