Abstract
We developed a new computer language that describes three-dimensional graphical objects for visual simulation. The language, 3D-Talk, is a powerful means for visualizing the process of protein folding simulation. 3D-Talk is designed as an object-oriented language, with which users can create, manipulate, and edit graphical objects using commands with a syntax like a natural language.
We developed two novel applications for molecular biology using 3D-Talk. One is ProView, a protein visualization tool. ProViewconverts the data of PDB (Protein Data Bank) into 3D-Talk statement. Another is a visual simulation system for protein folding. It simulates the motion of protein folding using simulated annealing techniques and Hidden Markov Models.
In short, 3D-Talk serves as a powerful animation tool.
