Journal of Computer Aided Chemistry
Online ISSN : 1345-8647
ISSN-L : 1345-8647
Efficient Calculation of Fragment Molecular Orbital Method with Continuous Multipole Method
Tatsuya NakanoKatsumi YamashitaKatsunori SegawaYoshio OkiyamaChiduru WatanabeKaori FukuzawaShigenori TanakaYuji Mochidzuki
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2012 Volume 13 Pages 44-50

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Abstract
Recently, fragment molecular orbital (FMO) method has attracted much attention as an electronic state calculation method for macromolecular system. When the size of a molecule grows, the ratio of the dimer calculation in the total computing time grows in the FMO method (O(N3)). To overcome this difficulty, the dimer-es approximation was developed; the dimer SCF calculation between distant monomers was approximated by that for fragments with electrostatic interaction. It has a dramatic effect on the reduction of computing time without loss of the accuracy of calculation when the molecular size grows (O(N2)). However, it becomes one of the bottlenecks for a large molecule because it is necessary to calculate the coulomb integral at four centers in the dimer-es approximation. Then, for the speed-up of the coulomb integral, continuous multiple method (CMM) was implemented in FMO program ABINIT-MPX, and the accuracy of calculation and the computing time were investigated in this article.
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© 2012 The Chemical Society of Japan
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