Journal of the Physical Society of Japan
Online ISSN : 1347-4073
Print ISSN : 0031-9015
ISSN-L : 0031-9015
Power Spectrum and Mutual Information Analyses of DNA Base (Nucleotide) Sequences
Yasuhiko IsohataMasaki Hayashi
Author information
JOURNAL RESTRICTED ACCESS

2003 Volume 72 Issue 3 Pages 735-742

Details
Abstract
On the basis of the power spectrum analyses for the base (nucleotide) sequences of various genes, we have studied long-range correlations in total base sequences which are expressed as 1⁄fα, behaviour of the exponent α for the accumulated base sequences as well as periodicities at short range. In particular from the analysis of content rate distributions of α we have obtained the average value \\barα=0.40±0.01 and \\barα=0.20±0.01 for the human genes and S. cerevisiae genes, respectively. We have also performed the analyses using the mutual information function. We show that there exists a clear difference between the content rate distributions of correlation lengths for the sample human genes and the S. cerevisiae genes. We are led to a conjecture that the elongation of the correlation length in the base sequences of genes from the early eukaryote (S. cerevisiae) to the late eukaryote (human) should be the definite reflection of the evolutionary process.
Content from these authors

This article cannot obtain the latest cited-by information.

© The Physical Society of Japan 2003
Previous article Next article
feedback
Top