Jornal of The Japanese Society for Gene Diagnosis and Therapy
Online ISSN : 2759-6060
Variant analysis of channelopathy genes in hemiplegic migraine (HM)
Itsuki OdaDaisuke DannoHaruka TadaAtsuko IkegawaAyami NakamuraShigekazu KitamuraMakito HiranoMakoto SamukawaTakao TakeshimaYoshitaka NagaiKazumasa Saigoh
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2025 Volume 2 Issue 1 Pages 7-11

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Abstract

Background and Purpose: The prevalence of migraine in Japan is 8%. However, the diagnosis of migraine by genetic testing has not been actively conducted nor covered by insurance. In this study, patients diagnosed with hemiplegic migraine (HM) were subjected to genetic testing of genes for migraine-associated diseases and channelopathies. We report on the genes and variant evaluation detected in that analysis.

Methods: Comprehensive genetic testing was performed on about 320 genes, including genes involved in channelopathies, epilepsy and neurological diseases, including causative genes (CACNA1A, ATP1A2, SCN1A) among familial hemiplegic migraine (FHM) in 45 patients diagnosed with HM. Genetic testing was performed using DNA derived from peripheral blood and analyzed with a next-generation sequencer.

Results: Analysis revealed that variants of ATP1A2 and SCN1A, which are considered to be causative genes of FHM, were detected in five cases and four cases, respectively. Variants of other genes involved in channelopathies were also detected. The variants detected were evaluated as Variant of uncertain significance (VUS).

Discussion: In this study, we performed genetic testing for FHM and other epilepsy and neurological disorders, and detected multiple variants, which were variants of VUS evaluation. From these, we believe that accumulating variants and clarifying the correlation between genotype and phenotype will lead to optimal treatment selection and prophylactic testing for clinical symptoms other than headache.

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© 2025 The Japanese Society for Gene Diagnosis and Therapy
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