Genome Informatics
Online ISSN : 2185-842X
Print ISSN : 0919-9454
ISSN-L : 0919-9454
Knowledge library of proteins on anonymous FTP/genome network
池内 義典磯山 正治瀬戸 保彦
著者情報
ジャーナル フリー

1993 年 4 巻 p. 441-445

詳細
抄録
We have been compiled knowledge libraries of proteins for anonymous FTP site on genome network. The libraries are asite, bsite, corn, horn, mot, mut, oligo, per, ster, top and xray. These libraries include reference list containing sequence-related knowledges and the references are extracted from literature databa.se (LITDB). Each library contains data in the format: one line for one record and each item is delimited by character “:”. Information in each library are as follows. asite: active site, bsite: binding site, com: conserved sequence, horn: homologous proteins, mot: motif sequences, mut: mutant proteins, oligo: oligonucleotide probe sequences for sequencing proteins, per: primer sequences for polymerase chain reaction, ster: references of stereo drawing, top: topics for proteins, xray: references of x-ray analysis of proteins. We show some example how to use these library with the UNIX commands: grep, sed, awk, sort, head etc.
著者関連情報
© Japanese Society for Bioinformatics
前の記事 次の記事
feedback
Top