＜ファクトデータベース・フリーウェア特集号＞　GeneLook サーバ: 原核生物の翻訳領域を予測するためのウェブツール

西 達也; 増田 泰; 氏家 義史; 森田 直樹; 北山 雅彦; 池村 淑道; 金谷 重彦

doi:10.2751/jcac.7.137

[Special Issue: Fact Databases and Freewares] The GeneLook Server: a Web-based Tool for Prediction of Prokaryotic Protein-coding Sequences

Tatsunari Nishi, Yasushi Masuda, Yoshifumi Ujiie, Naoki Morita, Masahiko Kitayama, Toshimichi Ikemura, Shigehiko Kanaya

Author information

Keywords: codon usage, gene prediction, initiation codon, annotation

JOURNAL FREE ACCESS

2006 Volume 7 Pages 137-140

DOI https://doi.org/10.2751/jcac.7.137

Details

Abstract

The GeneLook web server (http://www.genaris.co.jp/plaza/) provides an interface to an ab initio prokaryotic gene identification program, GeneLook. The GeneLook predicts protein-coding sequences (CDSs) with high accuracy with no prior knowledge of the sequence composition. The GeneLook identifies CDSs even from a short DNA sequence, but its length is recommended to be more than 10 kb to obtain satisfactory prediction results.

Corresponding author

Register with J-STAGE for free!