Transactions of Japanese Society for Medical and Biological Engineering
Online ISSN : 1881-4379
Print ISSN : 1347-443X
ISSN-L : 1347-443X
Organized Session
Development of supportive technology for multilevel modeling of physiological systems by PhysioDesigner
Yoshiyuki AsaiTakeshi AbeLi LiHideki OkaYoshihisa KurachiHiroaki Kitano
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2014 Volume 52 Issue Supplement Pages OS-76-OS-77

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Abstract
As multilevel physiological models is growing in size and complexity, it became more important to establish a platform enhancing model sharing and reuse. Toward this end, PhysioDesigner, a versatile platform for multilevel physiological modelling, has been developing. The version 1.0RC1 has been released on March 2014. Main features of PhysioDesigner are the following: explicit expression of model's hierarchical structure based on modules. Hybrid multilevel modelling incorporating SBML models. Large scale modelling using template/instance framework, integration of morphological data, and so on. In this presentation, focusing on a newly developed function, i.e. time series integration and visualization in 3 dimensional space, we introduce PhysioDesigner. With the new function, it is possible to integrate experimentally obtained or simulated time series data in modules, which can be used to constrain partially model's dynamics, or to drive mathematical model. Visualization function makes it easy to check a simulation results of models including morphological data.
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© 2014 Japanese Society for Medical and Biological Engineering
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