天然有機化合物討論会講演要旨集
Online ISSN : 2433-1856
第59回天然有機化合物討論会実行委員会
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29 Practical Protocol for Calculationg 13C Chemical Shifts for Conformationally Flexible Natural Products; Scope and Limitations (口頭発表の部)
*Warren HehrePhilip KlunzingerBernard Deppmeier内田 典孝橋本 勝福士 江里高田 祐輔
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会議録・要旨集 オープンアクセス

p. 169-174

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A multi-step protocol for calculating 13C chemical shifts for moderate-size flexible organic molecules was developpled. The protocol features a series of an initial molecular mechanics step to identify all reasonable low-energy conformers, a series of quantum chemical steps of increasing complexity to estimate Boltzmann weights and density functional calculations to obtain 13C spectra for all contributing conformers. This protocol was first applied to approximately 700 diverse natural products (MW: 140-930, average 360) established based on the X-ray crystallographic analyses to give small the RMS errors (average 2.0 ppm, max 4 ppm), demonstrating its high reliability. It was then applied to the other 1000 natural products of which structures were determined without X-ray crystallographic analyses (MW: 140-620, average 320). The obtained 13C shifts for the majority of these compounds were within agreement (RMS <4.0 ppm), as expected. However, the RMS errors for 〜10% of the natural products were substantially larger than those to allow. These were reinvestigated to propose the alternate structures in some cases. The suggested new structures afford agreeable RMS errors. The protocol has been fully automated inside the Spartan molecular modeling program, and can be executed by general desktop computers. So, it would support or challenge NMR structure assignments for many natural product chemists.

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