Abstracts for Annual Meeting of Japanese Proteomics Society

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JPrOS 2011 Conference (JHUPO 9th Conference)

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Educational Seminar 2

Quantitative proteomics

Takeshi Tomonaga

Session ID: E2-3
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.94.0

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Proteomics of post-translational modification

Hisashi Hirano

Session ID: E2-4
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.95.0

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Educational Seminar 3

GO annotation

Jun Adachi

Session ID: E3-1
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.96.0

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Mining Metabolic Network through Gene Expression

Hiroshi Mamitsuka

Session ID: E3-2
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.97.0

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Clustering for Comprehensive Genome Data Analysis

Motoki Shiga

Session ID: E3-3
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.98.0

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How to construct highly interoperability database.

Shin Kawano

Session ID: E3-4
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.99.0

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Poster Presentation

Analysis of protein expression in mouse embryonic stem cel cultured in hypoxia

Yuta Onodera, Takeshi Teramura, Toshiyuki Takehara, Kanji Fukuda

Session ID: P-001
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.100.0

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An Unbiased Approach to Increasing Proteome Coverage Using Ion Mobility with MSE

Futoshi Sato, Taiji Kawase, Maki Terasaki, Stapels Martha, Fadgen Keit ...

Session ID: P-002
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.101.0

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Comparison of human glomerulus proteomic profiles obtained from low quantities of samples by different mass spectrometry with the comprehensive database

Ying Zhang, Yutaka Yoshida, Bo Xu, Sameh Magdeldin, Hidehiko Fujinaka, ...

Session ID: P-003
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.102.0

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Determination of the localized sites of phosphorylation in casein using MALDI in-source decay mass spectrometry

Daiki Asakawa, Mitsuo Takayama

Session ID: P-004
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.103.0

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Analysis of abnormal cellular signals via silencing of NF1 tumor suppressor protein in neuronal cells by integrated proteomics

Mio Hirayama, Daiki Kobayashi, Takashi Morikawa, Megumi Nagayama, Uich ...

Session ID: P-005(S6-2)
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.104.0

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Dynamic analysis of expression level and post-translational modification profile of nephrin in nephrotic syndrome rat model

Junnichi kamiie, Hirotaka Kawakami, Kinji Shirota

Session ID: P-006(S6-3)
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.105.0

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Quantitative phosphoproteomic analysis of human colorectal cancer tissues

Takahisa Kuga, Ryohei Narumi, Tatsuo Murakami, Jun Adachi, Takashi Shi ...

Session ID: P-007(S6-4)
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.106.0

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Comparison of pretreatment methods for SISCAPA-SRM quantitation of Alzheimer’s disease biomarker peptide APL1-beta in plasma.

Shozo Sano, Shinji Tagami, Masayasu Okochi, Kumiko Yoshizawa-Kumagaye, ...

Session ID: P-008
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.107.0

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An Ion Mobility Enabled Data Independent Acquisition Strategy for the Quantitative characterization of Hepatocytes Secreted Rat Exosomes

Futoshi Sato, Maki Terasaki, Rodriguez-Suarez Eva, Coude-Vancells Javi ...

Session ID: P-009
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.108.0

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Shotgun proteomic LC-MS analysis of human cultured cells by using meter-long monolithic silica capillary columns

Mio Iwasaki, Masaki Wakabayashi, Minoru Nakano, Nobuo Tanaka, Yasushi ...

Session ID: P-010
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.109.0

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Protein analysis using automated two-dimensional electrophoresis and blotting system

Takateru Matsunaga, Uich Midorikawa, Yuji Maruo, Yutaka Unuma, Makoto ...

Session ID: P-011
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.110.0

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Proteomics for discovery of prognostic markers and therapeutic targets for early stage lung cancer

Akiko Okayama, Youhei Miyagi, Fumihiro Oshita, Akihide Ryo, Hisashi Hi ...

Session ID: P-012
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.111.0

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Discovery of novel markers for periodontal disease by quantitative shotgun proteomics

Sachio Tsuchida, Mamoru Satoh, Kazuyuki Sogawa, Yusuke Kawashima, Saya ...

Session ID: P-013
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.112.0

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Proteomic analysis of nuclear proteins from colorectal cancer tissues for identification of proteins involved in chromosomal instability

Rika Etchuya, Takahisa Kuga, Jun Adachi, Takeshi Tomonaga

Session ID: P-014
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.113.0

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Biomarker Discovery for Triglyceride Deposit Cardiomyovasculopathy using Proteome and Transcriptome Analysis.

Naoko Kawasaki, Kenichi Hirano, Yasuhiro Hara, Jun Adachi, Takeshi Tom ...

Session ID: P-015
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.114.0

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Identification and Quantification of Temporally Altered Proteins in Human Hepatocyte induced by Interleukin-6

Katsunori Nakata, Ryoitchi Saitoh, Jun Amano, Akiyo Koshiyama, Naoaki ...

Session ID: P-016
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.115.0

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Identification and relative quantitation of an orphan G-protein coupled receptor SREB2 (GPR85) protein in mouse brain using a linear ion trap mass spectrometer

Masatoshi Yuri, Masashi Hiramoto, Masanori Naito, Mitsuyuki Matsumoto, ...

Session ID: P-017
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.116.0

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Identification of proteins related carbon nanotube uptake

Hisao Haniu, Naoto Saito, Yoshikazu Matsuda, Kayo Suzuki, Eri Isahikaw ...

Session ID: P-018
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.117.0

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Quantitation of SILAC labeled protein using MRM assay

Ryo Yokoyama, Takeshi Shibata, Masato Aoshima, Takuichi Tsubata, Sumie ...

Session ID: P-019
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.118.0

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Absolute quantitation of plasma biomarker peptides for Alzheimer disease at pM level using SRM coupled with stable isotope standards and capture by anti-peptide antibodies.

Shio Watanabe, Shinji Tagami, Seizo Sano, Kumiko Yoshizawa-Kumagaye, M ...

Session ID: P-020
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.119.0

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New Approach to Correct SILAC Data

Noriyuki Inomata, Hironori Mutoh, Nami Yabuki, Kohji Nagano, Takashi S ...

Session ID: P-021
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.120.0

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N-Terminal methylation of yeast proteasome subunit

Yayoi Kimura, Kayoko Nagata, Akiyo Ishikawa, Hisashi Hirano

Session ID: P-022
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.121.0

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Alteration of post-translational modifications on a U1 small nuclear ribonucreoprotein 68k subunit, a major antigen for anti-RNP autoantibodies, in systemic autoimmune diseases.

Kouhei Nagai, Mitsumi Arito, Yukiko Takakuwa, Seido Ooka, Toshiyuki Sa ...

Session ID: P-023
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.122.0

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Altered glycosylation of proteins in patients with rheumatoid arthritis

Toshiyuki Sato, Seido Ooka, Yukiko Takakuwa, Kouhei Nagai, Mitsumi Ari ...

Session ID: P-024
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.123.0

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Analysis of glycoproteins by gel electrophoresis with methacrylphenyl boronic acid

Yuichi Aikyo, Kenichi Nakazato, Masamichi Oh-Ishi

Session ID: P-025
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.124.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Quantitation of Phosphopeptides Using Chip-based TiO2 Enrichment and MRM Mass Spectrometry

HIROSHI SEZAKI, Miller Christine, Tang Ning, HIROKAZU SAWADA

Session ID: P-026
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.125.0

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Quantitative phosphoproteomic approaches for analyzing minuscule tissue samples.

Masaki Wakabayashi, Mai Tsukahara, Hiroki Yoshihara, Takeshi Masuda, Y ...

Session ID: P-027
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.126.0

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Phosphoproteomic analysis of human colorectal cancer tissues for exploring a novel factor involved in cancer metastasis

Takashi Shiromizu, Ryouhei Narumi, Takahisa Kuga, Jun Adachi, Hisahiro ...

Session ID: P-028
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.127.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Phosphoproteomic analysis of secondary imatinib resistance in GIST

Kayoko Nagata, Yuya Yanagisawa, Ayako Nomura, Yayoi Kimura, Yuji Sakum ...

Session ID: P-029(S6-5)
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.128.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Identification of the phosophoproteins implicated in the malignant progression of ovarian clear cell adenocarcinoma using quantitative label-free phosphoproteomics

Ayuko Kimura, Kazunori Sakai, Ayako Nomura, Takao Kawakami, Noriaki Ar ...

Session ID: P-030
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.129.0

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In vitro phosphoproteomic analysis of protein kinase specificity in substrate recognition

Haruna Imamura, Naoyuki Sugiyama, Masaki Wakabayashi, Minoru Nakano, Y ...

Session ID: P-031
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.130.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Screening of Rho kinase substrates by combining inhibitors of protein kinase and phosphatase

Tomoki Nishioka, Masanori Nakayama, Mutsuki Amano, Kozo Kaibuchi

Session ID: P-032
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.131.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Global phosphorylation and ubiquitination dynamics in DNA-damage response network

Jun Adachi, Ryohei Narumi, Shozo Sano, Takahisa Kuga, Takashi Shiromiz ...

Session ID: P-033
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.132.0

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Highly sensitive phosphoproteome analysis for minute number of cells

Takeshi Masuda, Yasuyuki Igarashi, Masaru Tomita, Jun Namiki, Naoyuki ...

Session ID: P-034
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.133.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Proteomic analyses for identification and characterization of mTOR substrates

Hirokazu Nakatsumi, Masaki Matsumoto, Kouji Oyamada, Keiichi Nakayama

Session ID: P-035
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.134.0

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Quantitative phosphoproteome analysis in differentiation of cells forming lobulated nuclei

Mitsuaki Yanagida, Masako Miura, Kenji Takamori

Session ID: P-036
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.135.0

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A peptide microarray using improved Phos-tag Biotin for protein phosphorylation profiling

Eiji Kinoshita, Emiko Kinoshita-Kikuta, Tohru Koike

Session ID: P-037
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.136.0

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Improved Phos-tag SDS-PAGE under Neutral pH Conditions for Advanced Protein Phosphorylation Profiling

Emiko Kinoshita-Kikuta, Eiji Kinoshita, Tohru Koike

Session ID: P-038
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.137.0

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Ion mobility MS of glycopeptides from the Fc regions of different IgG subclasses

Michiko Tajiri, Kenji Hirose, Yoshinao Wada

Session ID: P-039
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.138.0

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Plastid targeting of NPP glycoprotein from the golgi apparatus through the secretory pathway in rice cell

Kentaro Kaneko, Tsutomu Kosyu, Yukiho Umezawa, Takuya Ishimoto, Maho A ...

Session ID: P-040
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.139.0

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Proteome research of murine liver tissues of NASH model mouse

Bo XU, Shuichiro SHIMADA, Masaaki TAKAMURA, Ying ZHANG, Ezanee AZLINA, ...

Session ID: P-041
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.140.0

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Development of high-throughput yeast screening method using proteomics technique.

Yoichi Sakakibara, Ryohei Kugimoto, Hiroyuki Morinaga, Hiroshi Sakaida ...

Session ID: P-042
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.141.0

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Development of autopsy tissue bank applicable to proteome research

Motoji Sawabe, Tomio Arai, Shigeo Murayama, Takahiko Shimizu, Toshifus ...

Session ID: P-043
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.142.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Proteomic analysis of human carotid arteries and atherosclerotic plaques

Masaya Ikegawa, Hatsue Ueda, Takashi Shimada, Tetsuo Iida, Hideshi Fuj ...

Session ID: P-044
Published: 2011
Released on J-STAGE: October 01, 2015

DOIhttps://doi.org/10.14889/jhupo.2011.0.143.0

CONFERENCE PROCEEDINGS FREE ACCESS

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