Abstracts for Annual Meeting of Japanese Proteomics Society

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Conference on Mass Spectrometry and Proteomics (MSP2018)

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Plenary Lecture

Looking Back on my 30 Years of Autophagy Studies

Yoshinori Ohsumi

Session ID: 2A-PL-0900
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2a-pl-0900.0

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Mass Spectrometric Technologies and their Application to Signalingand Clinical Proteomics

Matthias Mann

Session ID: 4A-PL-1315
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-pl-1315.0

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Invited Lecture

The “big data" age has arrived to proteomics: a world full ofpossibilities

Juan Antonio Vizcaino

Session ID: 3A-IL-P-1425
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-il-p-1425.0

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Lung Cancer Biomarkers by MS-Proteomics and Validation by DiagnosticAssay

Hye-Jin Sung, Yong-In Kim, Jung-Mo Ahn, Soo-Youn Lee, Hyun-Joo An, Je- ...

Session ID: 3A-IL-K-1525
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-il-k-1525.0

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Award Lecture

A multiplexed co-synthesis system for stable isotope-labeled peptidestandards using wheat germ cell-free synthesis and its applicationto quantitative proteomics

Nobuaki Takemori

Session ID: 3A-AW-1745
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-aw-1745.0

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Symposium

Component and Functional Investigation of Royal Jelly Collecting onDifferent Grafting Times

Jianke Li

Session ID: 2B-O1-P-1005
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2b-o1-p-1005.0

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Understanding of ABA-dependent phosphosignaling pathways in landplants

Anna Amagai, Yoshimasa Honda, Yurie Hara, Shinnosuke Ishikawa, Mayuri ...

Session ID: 2B-O1-P-1025
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2b-o1-p-1025.0

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Insights into Nanoparticles Interaction with Soybean at theProteomics Level

Ghazala Mustafa, Setsuko Komatsu

Session ID: 2B-O1-P-1045
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2b-o1-p-1045.0

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Soybean Omics to Reveal the Flooding-Tolerant Mechanism at InitialStage

Setsuko Komatsu, Katsumi Sakata

Session ID: 2B-O1-P-1105
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2b-o1-p-1105.0

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System level understanding of host-specific immune dynamics in<I>Fusarium</I> wilt in plant

Eman Elagamey, Kanika Narula, Sudip Ghosh, Arunima Sinha, Pooja R. Agg ...

Session ID: 2B-O1-P-1125
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2b-o1-p-1125.0

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Assessment by matrix-assisted laser desorption/ionizationtime-of-flight mass spectrometry of the effects of preanalyticalvariables on serum peptidome profiles following long-term samplestorage

Sachio Tsuchida, Mamoru Satoh, Hiroshi Umemura, Kazuyuki Sogawa, Masak ...

Session ID: 2C-O1-P-1005
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2c-o1-p-1005.0

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Improvement of comprehensive phosphotyrosine proteomics

Yuichi Abe, Asa Tada, Junko Isoyama, Maiko Nagano, Takahisa Kuga, Ayak ...

Session ID: 2C-O1-P-1025
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2c-o1-p-1025.0

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Phosphoproteomic Approaches for the Elucidation of CellularSignaling Mechanisms

Hidetaka Kosako

Session ID: 2C-O1-P-1045
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2c-o1-p-1045.0

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Practical application of pathway databases and software for thetrans-omic analysis

Katsuyuki Yugi

Session ID: 2C-O1-P-1105
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.2c-o1-p-1105.0

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Technical Progresses and Applications of Targeted Proteomics

Sumio Ohtsuki, Takeshi Masuda, Shingo Ito

Session ID: 3A-O1-P-0900
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o1-p-0900.0

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Using Data Independent Acquisition (DIA) combined with resourcespectral libraries in the discovery of lung cancer biomarkers

Florian Marty, Sira Echevarria Zomeno, Lukas Reiter

Session ID: 3A-O1-P-0930
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o1-p-0930.0

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Comprehensive characterization of ‘chromatome' by SWATH-MS

Atsushi Hatano, Masaki Matsumoto, Keiichi I. Nakayama, Shinya Kuroda

Session ID: 3A-O1-P-0945
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o1-p-0945.0

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Nuclear Enrichment toward Large Scale Profiling of TranscriptionFactors

Takeshi Masuda, Shingo Ito, Sumio Ohtsuki

Session ID: 3A-O1-P-1000
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o1-p-1000.0

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Mechanism of Cytoskeletal Protein Dynamics Revealed by theCombination of Multiple Protein Analyses

Tadayuki OGAWA, Nobutaka HIROKAWA

Session ID: 3A-O1-P-1015
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o1-p-1015.0

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Nascent protein analysis and its application for novel proteinidentification

Shungo Adachi, Akihisa Kato, Yasushi Kawaguchi, Tohru Natsume

Session ID: 3A-O1-P-1030
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o1-p-1030.0

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Quantitative and qualitative proteomic strategies based oncombination of a variety of experimental techniques

Keiji Kito

Session ID: 3A-O1-P-1045
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o1-p-1045.0

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Large-scale Identification and Visualization of N-glycome withPrimary Structures Using GlySeeker

Kaijie Xiao, Yuyin Han, Zhixin TIAN

Session ID: 3A-O2-P-1555
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o2-p-1555.0

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Proteomic-scale approaches for quantifying irreversible cysteineredox post-translational modifications using parallel reactionmonitoring mass spectrometry in myocardial ischemia / reperfusion

Stuart Cordwell

Session ID: 3A-O2-P-1615
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o2-p-1615.0

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Discovery of colorectal cancer biomarkers in serum extracellularvesicles by targeted proteomics

Takeshi Tomonaga, Takashi Shiromizu

Session ID: 3A-O2-P-1635
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o2-p-1635.0

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Proteomics studies at NCP

Shamshad Zarina

Session ID: 3A-O2-P-1655
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o2-p-1655.0

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Proteomics and Metabolomics approaches for discovery of potentialcandidate biomarkers for Coronary Artery Disease

Shantanu Sengupta

Session ID: 3A-O2-P-1715
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.3a-o2-p-1715.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Global Identification and Functional Characterization of ProteinKinase Substrates using Various Phosphoproteomic Technologies

Hidetaka Kosako

Session ID: 4A-O1-P-0900
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o1-p-0900.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Phosphorylation Network Analysis Based on Kinome Profiling

Naoyuki Sugiyama, Haruna Imamura, Dai Sakamoto, Junna Nakazono, Kazuta ...

Session ID: 4A-O1-P-0920
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o1-p-0920.0

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Phosphoproteomics of non-small-cell lung cancer cells treated witherlotinib reveals drug-resistant signatures and potential targets

Jun ADACHI, Yuichi Abe, Maiko Nagano, Ayako Sato, Marina Kishida, Take ...

Session ID: 4A-O1-P-0940
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o1-p-0940.0

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An improved method for cell type-specific glycomic analysis offormalin-fixed paraffin-embedded tissue sections in combination withhistochemical stainingAn improved method for cell type-specificglycomic analysis of formalin-fixed paraffin-embedded

Chiaki Nagai-Okatani, Misugi Nagai, Atsushi Kuno

Session ID: 4A-O1-P-1000
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o1-p-1000.0

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Selective Degradation of Splicing Factor CAPERα by AnticancerSulfonamides

Taisuke Uehara, Yukinori Minoshima, Koji Sagane, Naoko Hata, Kaoru Mit ...

Session ID: 4A-O1-P-1020
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o1-p-1020.0

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Applications of proteomics for drug discovery and development

Kazuishi Kubota

Session ID: 4A-O1-P-1040
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o1-p-1040.0

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High Efficient and Precise Glycoproteomic Analysis with IntelligentTechnology

Pengyuan Yang, Weiqian Cao, Mingqi Liu, Wenfeng Zeng, Chao Liu, Pan Fa ...

Session ID: 4A-L-P-1220
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-l-p-1220.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Development of salivary protein biomarkers for oral cancer

Jau-Song Yu, Yung-Chin Hsiao, Lichieh Julie Chu, Yi-Ting Chen, Wei-Fan ...

Session ID: 4A-L-P-1240
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-l-p-1240.0

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Development of ELISA assay by eiptope mapping of CagA proteinrecognized by antibodies in sear for the prevention of Japanesechildren from chronic infection of <I>Helicobacterpylori</I>

Kazuyuki Nakamura, Takamichi Takahashi, Toshiko Fujii, Satoshi Tanimur ...

Session ID: 4A-L-P-1300
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-l-p-1300.0

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A Proteomic Landscape of Diffuse-type Gastric Cancer

Jun Qin, Bei Zhen

Session ID: 4A-O2-P-1425
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o2-p-1425.0

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Systematic discovery of cancer biomarkers by integrativepost-translational modification-directed proteomics

Masaaki Oyama, Hiroko Kozuka-Hata

Session ID: 4A-O2-P-1505
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o2-p-1505.0

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Development of enzymomics approach to search for disease-relatedalternation of enzymatic functions

Toru Komatsu, Jun Onagi, Yuki Ichihashi, Koichi Yanagi, Shusuke Ogihar ...

Session ID: 4A-O2-P-1525
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o2-p-1525.0

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A functional role of LEFTY as a molecular marker for ovarian clearcell carcinoma

Toshihide Matsumoto, Masashi Akiya, Yusuke Kawashima, Yoshio Kodera, A ...

Session ID: 4A-O2-P-1545
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o2-p-1545.0

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Proteogenomics for sarcoma research: International CancerProteogenomics Consortium (ICPC)

Tadashi Kondo, Enu Hattiru, Kumiko Shiozawa, Masayha Ono, Mari Masuda, ...

Session ID: 4A-O2-P-1605
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4a-o2-p-1605.0

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Comprehensive phosphoproteomics from biopsy specimens

Yuichi Abe, Hirokazu Syoji, Hirano Hirano, Jun Adachi, Narikazu Boku, ...

Session ID: 4B-O1-P-0900
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o1-p-0900.0

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Establishment of method for peptidome analysis from a small amountof tissue

Yuzuru NAKAGAWA, Takuya Yamada, Takaki Tsunoda, Kazumi Fujimoto, Makot ...

Session ID: 4B-O1-P-0915
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o1-p-0915.0

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Quantitative proteomic assessment of differences and stability ofhuman serum and plasma proteins

Madoka Nambu

Session ID: 4B-O1-P-0930
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o1-p-0930.0

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Development and application of strategy for comparative analysis ofprotein expression and functional state.

Ryo KONNO, Kana Hiramatsu, Hiroaki Itou, Masataka Higuchi, Makoto Itak ...

Session ID: 4B-O1-P-0945
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o1-p-0945.0

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Identification of internalized plasma membrane proteins in humanbrain capillary endothelial cells.

Mariko Oishi

Session ID: 4B-O1-P-1000
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o1-p-1000.0

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Drought stress characterization of tolerant and sensitive barleygenotypes through Proteomics analysis

Rehana Kausar, Muhammad Arshad, Armghan Shahzad, Setsuko Komatsu

Session ID: 4B-O1-P-1015
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o1-p-1015.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Comparative Phosphoproteomic Analysis of Fresh and After-ripenedBarley seeds

Shinnosuke Ishikawa, Fuminori Takahashi, Jose M Barrero, Hirofumi Naka ...

Session ID: 4B-O1-P-1030
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o1-p-1030.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Soybean Proteomics: A Leading Tool in Exploring Effects of FloodingStress using Proteomic Technique

Amana Khatoon, Shafiq Rehman, Muhammad Jamil, Setsuko Komatsu

Session ID: 4B-O1-P-1045
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o1-p-1045.0

CONFERENCE PROCEEDINGS FREE ACCESS

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Ribosomics reveals a novel mechanism for translational regulation

Koshi Imami, Miha Milek, Boris Bogdanow, Tomoharu Yasuda, Yasushi Ishi ...

Session ID: 4B-O2-P-1425
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o2-p-1425.0

CONFERENCE PROCEEDINGS FREE ACCESS

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TMT-based Quantitative Mass Spectrometry Reveals Proteomic Shiftsbetween Traditional Hydrated Biofilm and DSB from Staphylococcusaureus: One Step Forward with Dry Surface Biofilm (DSB)

Md Arifur Rahman, Durdana Chowdhury, Ardeshir Amirkhani, Honghua Hu, M ...

Session ID: 4B-O2-P-1445
Published: 2018
Released on J-STAGE: March 01, 2019

DOIhttps://doi.org/10.14889/jhupo.2018.0.4b-o2-p-1445.0

CONFERENCE PROCEEDINGS FREE ACCESS

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