To quantify
Candidatus ‘Accumulibacter phosphatis’ in activated sludge, quantitative PCR method was developed utilizing SYBR GREEN I and a specific primer set targeted on the 16S rRNA gene of
Candidatus ‘Accumulibacter phosphatis’. Following optimization of PCR condition, specificity was evaluated based on the melting curve and the sequencing analysis of the PCR products with DNA extracted from activated sludge. Both the melting curve and the sequencing analysis of the PCR product showed that only the target DNA from
Candidatus ‘Accumulibacter phosphatis’ was amplified. Standard curves with a series of tenfold dilution of the DNA from 16S rRNA gene fragment of
Candidatus ‘Accumulibacter phosphatis’ gave R
2 values greater than 0.999. The minimum detection limit was 1.0×10
3 copies per reaction. The amount of
Candidatus ‘Accumulibacter phosphatis’ in laboratory-scale and full-scale activated sludge samples were quantified both by the quantitative PCR method and by the FISH method. The quantification results by these two methods agreed satisfactorily, with an R
2 value of 0.6871 showing a statistically significant correlation (p<0.001). Thus, we developed a rapid quantification method by using quantitative PCR for the quantification of
Candidatus ‘Accumulibacter phosphatis’ in activated sludge.
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