Cell Structure and Function
Online ISSN : 1347-3700
Print ISSN : 0386-7196
Automatic quantitative segmentation of myotubes reveals single-cell dynamics of S6 kinase activation
Haruki InoueKatsuyuki KunidaNaoki MatsudaDaisuke HoshinoTakumi WadaHiromi ImamuraHiroyuki NojiShinya Kuroda
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JOURNALS FREE ACCESS Advance online publication

Article ID: 18012

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Abstract

Automatic cell segmentation is a powerful method for quantifying signaling dynamics at single-cell resolution in live cell fluorescence imaging. Segmentation methods for mononuclear and round shape cells have been developed extensively. However, a segmentation method for elongated polynuclear cells, such as differentiated C2C12 myotubes, has yet to be developed. In addition, myotubes are surrounded by undifferentiated reserve cells, making it difficult to identify background regions and subsequent quantification. Here we developed an automatic quantitative segmentation method for myotubes using watershed segmentation of summed binary images and a two component Gaussian mixture model. We used time lapse fluorescence images of differentiated C2C12 cells stably expressing Eevee S6K, a fluorescence resonance energy transfer (FRET) biosensor of S6 kinase (S6K). Summation of binary images enhanced the contrast between myotubes and reserve cells, permitting detection of a myotube and a myotube center. Using a myotube center instead of a nucleus, individual myotubes could be detected automatically by watershed segmentation. In addition, a background correction using the two components Gaussian mixture model permitted automatic signal intensity quantification in individual myotubes. Thus, we provide an automatic quantitative segmentation method by combining automatic myotube detection and background correction. Furthermore, this method allowed us to quantify S6K activity in individual myotubes, demonstrating that some of the temporal properties of S6K activity such as peak time and half-life of adaptation show different dose-dependent changes of insulin between cell population and individuals.
Key words: time lapse images, cell segmentation, fluorescence resonance energy transfer, C2C12, myotube

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© 2018 The Author(s) CC-BY 4.0 (Submission before October 2016: Copyright © Japan Society for Cell Biology)
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