Journal of Proteome Data and Methods
Online ISSN : 2434-6454
Data for proteogenomic analysis of two patient-derived undifferentiated pleomorphic sarcoma cell lines
Rei NoguchiHidetaka KosakoKazuki SasakiTadashi Kondo
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Supplementary material

2023 Volume 5 Pages 13-

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Abstract

To compare the difference between the public database search and sample-specific database search generated by home-made software “OncoProGx”, we conducted two LC-MS/MS runs for two patient-derived undifferentiated pleomorphic sarcoma cell lines. The numbers of identified peptides and proteins were almost same between two database search methods. The novel sample-specific peptides such as mutated peptides and new transcript isoforms were identified using only “OncoProGx.”

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この記事はクリエイティブ・コモンズ [表示 4.0 国際]ライセンスの下に提供されています。
https://creativecommons.org/licenses/by/4.0/deed.ja
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