Some cultivars of loquat [
Eriobotrya japonica (Thunb.) Lindl.; Rosaceae, Pyrinae] show gametophytic self-incompatibility controlled by a single, multi-allelic
S locus, as in Japanese pear and apple. The
S-genotype of loquat is an important factor for crossing and breeding. In this study, we tested a method to predict the
S-genotype of some loquats by sequencer analysis. Sequencing revealed ten different band sizes. The nucleotide and amino acid sequences of five of these bands were identical to
S-RNase sequences of loquat previously reported. Those of the other five bands were different from previous reports, but showed high-level homology with
S-RNase sequences of apple and pear, and which conserved key cysteine and histidine residues. We conclude that the different sequences are likely to be new
S alleles. The predicted
S-genotypes of about 145 loquat cultivars and lines could be classified into 25 types. We confirmed that the main cultivars in Japan—‘Mogi’, ‘Tanaka’, and ‘Nagasakiwase’—are self-compatible at the gene level. The results suggest that the 41 cultivars and lines were self-incompatible.
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