Compound-specific isotope analysis (CSIA) application to host and symbiont species within a symbiotic partnership, which are corals and their algal symbionts, respectively, allows us to quantify the trophic interaction between two different species within a symbiosis such as the flux of energy and nutrients from algal symbionts to animal hosts. Therefore, we established an isolation method of algal symbionts, zooxanthellae, from corals, which minimizes the contamination of coral tissues and the breakage of algal cells for the CSIA application. Applying a multiple filtration and a weak centrifugation, we successfully purified algal symbionts from coral tissues enough to measure the nitrogen isotope ratios of amino acids of algal symbionts, such that the isotope ratios are 7.4‰ and 4.0‰ for glutamic acid and phenylamine for a soft coral, the zoanthidZoanthussp. The trophic position estimated based on these isotope ratios is 1.0 for the algal symbionts, which is clearly distinguished from that (i.e., trophic position is 2.0) of coral hosts. Thus, the purification method established in our study can be useful for evaluating the trophic interaction between host and algal symbionts for corals.
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