X-ray Structure Analysis Online
Online ISSN : 1883-3578
ISSN-L : 1883-3578
36 巻
選択された号の論文の17件中1~17を表示しています
Part 1
  • Masahiro MIKURIYA, Kazuki TANIGUCHI, Yoshiki KOYAMA, Hiroaki WATANABE, ...
    2020 年 36 巻 p. 1-2
    発行日: 2020/01/10
    公開日: 2020/01/10
    ジャーナル フリー
    電子付録

    Sulfur S8 was isolated from a reaction solution of thiourea and bismuth nitrate in N,N-dimethylformamide. The crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the orthorhombic space group Fddd with a = 10.3310(8)Å, b = 12.6786(10)Å, c = 24.3519(19)Å, V = 3189.7(4)Å3, Dx = 2.136 g/cm3, and Z = 6. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0220 and 0.0570, respectively, for all 1864 independent reflections. The S8 molecule has a crown-shaped ring structure with the α-form.

Part 2
  • Masahiro MIKURIYA, Shuichi HIROSHIMA, Yoshiki KOYAMA, Keisuke TERADA, ...
    2020 年 36 巻 p. 3-5
    発行日: 2020/02/10
    公開日: 2020/02/10
    ジャーナル フリー
    電子付録

    Sodium tetraperoxidochromate(V), Na3Cr(O2)4·14H2O, was prepared and the crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the triclinic space group P1 with a = 7.5349(6)Å, b = 8.6378(7)Å, c = 8.9921(7)Å, α = 64.087(1), β = 81.565(1), γ = 69.348(1)°, V = 492.56(7)Å3, Dx = 1.690 g/cm3, and Z = 1. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0277 and 0.0722, respectively, for all 2310 independent reflections. The chromium ion is coordinated by four peroxido ligands in a distorted dodecahedral geometry, whereas each sodium ion is coordinated by six water molecules to form an octahedral Na(H2O)6 unit, which is connected by two bridging water molecules to form zigzag [cis-{Na(H2O)2(μ-H2O)4}-trans-{Na(H2O)2(μ-H2O)4}]n chain molecules in the crystal.

Part 3
Part 4
  • Sami AYARI, Kazunori HIRABAYASHI, Toshio SHIMIZU, Bassem JAMOUSSI, Meh ...
    2020 年 36 巻 p. 11-13
    発行日: 2020/04/10
    公開日: 2020/04/10
    ジャーナル フリー
    電子付録

    Phthalonitrile-3-yl (PN3) substituted indole derivative 1 was structurally characterized. The compound was crystallized in a monoclinic system and characterized as follows: P21/c, a = 23.232(5), b = 7.4413(14), c = 15.361(4)Å, β = 106.818(5)°, Z = 8, V = 2542.0(10)Å3. The crystal structure was solved by direct methods and refined by full-matrix least-squares on F2 to the final values of R1 = 0.0660 and wR2 = 0.1610. 1 has two crystallographically independent molecules in the asymmetric unit. The dihedral angle between indole and PN3 is 42.17(8)°. Theoretical studies revealed that the rotational barrier of PN3 is 8.82 kcal mol−1. 1H NMR spectroscopy demonstrated an interesting long-range spin–spin coupling between benzylic H of the methyl group and the adjacent aromatic H through four bonds with a coupling constant of 1.3 Hz (in acetone-d6). The double-bond character of the bond connecting these protons is responsible for this phenomenon.

Part 5
Part 6
  • Masahiro MIKURIYA, Nanami WATANABE, Yoshiki KOYAMA, Daisuke YOSHIOKA, ...
    2020 年 36 巻 p. 17-19
    発行日: 2020/06/10
    公開日: 2020/06/10
    ジャーナル フリー
    電子付録

    The crystal structure of manganese(II) hexafluorosilicate hexahydrate, [Mn(H2O)6]SiF6, was determined by the single-crystal X-ray diffraction method at 90 K. The complex crystallizes in the monoclinic space group P21/c with a = 6.473(3), b = 9.639(5), c = 8.579(4)Å, β = 100.009(7)°, V = 527.2(4)Å3, Dcalcd = 1.922 g/cm3, Z = 2. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0330 and 0.0734, respectively, for all 1278 independent reflections. The manganese(II) ion is located at the crystallographic inversion center with six water molecules, each of which is disordered into two positions, forming a distorted octahedral geometry. The hexafluorosilicate ion is also located at the crystallographic inversion center with six disordered fluoride atoms. The temperature dependence of the magnetic susceptibility obeys the Curie–Weiss law with C = 4.476(2)cm3 mol−1, θ = –0.39(6)K, showing almost no magnetic interaction between the metal centers.

Part 7
Part 8
Part 9
  • Ryoji MITSUHASHI, Masahiro MIKURIYA
    2020 年 36 巻 p. 33-34
    発行日: 2020/09/10
    公開日: 2020/09/10
    ジャーナル フリー
    電子付録

    The crystal structure of the Ru(III) complex with 2-(2-imidazolinyl)phenolate was determined by X-ray crystallography. The title compound was synthesized by a reaction of RuCl3·nH2O and 2-(2-imidazolinyl)phenolate in ethanol. The compound crystallized in the monoclinic space group P21/c and Z = 4 with cell parameters a = 10.2053(18)Å, b = 33.277(6)Å, c = 8.8733(15)Å, β = 113.904(3)°, V = 2754.9(8)Å3. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0711 and 0.1487, respectively, for all 6316 independent reflections. The title compound was found to take a meridional configuration. In the crystal, a centrosymmetric dimer structure was formed by intermolecular hydrogen-bonds between the coordinating phenolate-O atom (O2) of a ligand and a noncoordinating N–H bond (N5–H5A) in the symmetry equivalent ligand.

  • Md Awlad HOSSAIN, Kazunori HIRABAYASHI, Tohru NISHINAGA, Toshio SHIMIZ ...
    2020 年 36 巻 p. 35-37
    発行日: 2020/09/10
    公開日: 2020/09/10
    ジャーナル フリー
    電子付録

    The molecular structure of sterically crowded 1,4,5,8-tetrabromonaphthalene 1 was refined. The compound crystallized in a monoclinic system and was characterized as follows: P21/c, a = 9.470(3), b = 15.530(4), c = 7.340(2)Å, β = 92.147(9)°, Z = 4, V = 1078.7(5)Å3. The crystal structure was solved by direct methods and refined by full-matrix least-squares on F2 to final values of R1 = 0.0332 and wR2 = 0.0572. Because of the steric repulsion between the peri-bromines, 1 takes a twisted structure having a D2 point group, i.e., a chiral structure. Symmetry operation of this space group generates the corresponding enantiomer in the crystal. In marked contrast to the noticeably short intramolecular Br–Br contact of 3.209 Å (average), there is no short Br–Br contact intermolecularly.

Part 10
Part 11
Part 12
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