日本の森林樹木の地理的遺伝構造（47）シャクナンガンピ属（ジンチョウゲ科）

References

•  Alexander  DH,  Novembre  J,  Lange  K (2009) Fast modelbased estimation of ancestry in unrelated individuals. Genome Research 19: 1655–1664
•  Excoffier  L,  Marchi  N,  Marques  DA,  Matthey-Doret  R,  Gouy  A,  Sousa  VC (2021) fastsimcoal2: demographic inference under complex evolutionary scenarios. Bioinformatics 37: 4882–4885
• 平田正一（1974）鬼の目山のツチビノキ自生原始林調査．宮崎県文化財報告書第21 集: 5–18
•  Liu  XM,  Fu  YX (2020) Stairway Plot 2: demographic history inference with folded SNP frequency spectra. Genome Biology 21: 280
•  Manchester  SR,  Chen  ZD,  Lu  AM,  Uemura  K (2009) Eastern Asian endemic seed plant genera and their paleogeographic history throughout the Northern Hemisphere. Journal of Systematics and Evolution 47: 1–42
•  Masamune  G (1934) Floristic and geobotanical studies on the island of Yakushima, Province Osumi. Memoirs of the Faculty of Science and Agriculture, Taihoku Imperial University, Botany 11: 1–36
•  Mussmann  SM,  Douglas  MR,  Chafin  TK,  Douglas  ME (2019) BA3-SNPs: Contemporary migration reconfigured in BayesAss for next-generation sequence data. Methods in Ecology and Evolution 10: 1808–1813
• 中尾登志雄・黒木嘉久・細山田典昭・外山三郎（1986）九州本土の天然杉：大崩山系鬼ノ目山のスギ群落．森林立地 28: 1–10
•  Qian  H (2002) A comparison of the taxonomic richness of temperate plants in East Asia and North America. American Journal of Botany 89: 1818–1825
•  Qian  H,  Ricklefs  RE (2000) Large-scale processes and the Asian bias in species diversity of temperate plants. Nature 407: 180–182
•  Sakaguchi  S,  Asaoka  Y,  Takahashi  D,  Isagi  Y,  Imai  R,  Nagano  AJ, …  Setoguchi  H (2021) Inferring historical survivals of climate relicts: the effects of climate changes, geography, and population-specific factors on herbaceous hydrangeas. Heredity 126: 615–629
•  Sakaguchi  S,  Nagano  AJ,  Yasugi  M,  Kudoh  H,  Ishikawa  N,  Ito  M (2020) Genetic consequences of being a dwarf: do evolutionary changes in life-history traits influence gene flow patterns in populations of the world’s smallest goldenrod? Annals of Botany 126: 163–177
•  Suyama  Y,  Hirota  SK,  Matsuo  A,  Tsunamoto  Y,  Mitsuyuki  C,  Shimura  A,  Okano  K (2022) Complementary combination of multiplex high-throughput DNA sequencing for molecular phylogeny. Ecological Research 37: 171–181
•  Suyama  Y,  Matsuki  Y (2015) MIG-seq: an effective PCRbased method for genome-wide single-nucleotide polymorphism genotyping using the next-generation sequencing platform. Scientific Reports 5: 16963
•  Takahashi  D,  Isagi  Y,  Li  P,  Qiu  YX,  Setoguchi  H,  Suyama  Y, …  Sakaguchi  S (2022) Stable persistence of relict populations involved evolutionary shifts of reproductive characters in the genus Tanakaea (Saxifragaceae). Journal of Systematics and Evolution 60: 1405–1416
•  Takahashi  D,  Suyama  Y (2023) Demographic history and conservation aspects of two relict shrubs (Daphnimorpha spp., Thymelaeaceae) showing disjunct and restricted distribution in the southern part of Japan. Tree Genetics and Genomes 19: 43
•  Takahashi  D,  Suyama  Y,  Fukushima  K,  Setoguchi  H,  Sakaguchi  S (2024) Deer grazing drove an assemblage-level evolution of plant dwarfism in an insular system. Journal of Ecology 112: 1383–1396
•  Takahashi  T,  Tani  N,  Taira  H,  Tsumura  Y (2005) Microsatellite markers reveal high allelic variation in natural populations of Cryptomeria japonica near refugial areas of the last glacial period. Journal of Plant Research 118: 83–90
•  Waples  RS,  Do  C (2008) ldne: a program for estimating effective population size from data on linkage disequilibrium. Molecular Ecology Resources 8: 753–756
•  Yumoto  T (1988) Pollination systems in the cool temperate mixed coniferous and broad-leaved forest zone of Yakushima Island. Ecological Research 3: 117–129