The β-glucosidase (EC 3.2.1.21, βGA) preparation purified from Aspergillus niger (Novozym 188DCN0003) was confirmed to be a monomer protein of Mw 137, 000. With this preparation, binding of glucono-l:5-lactone (GLN) to βGA was studied using fluorescence-spectrophotometric and stopped flow kinetic experiments on the basis of Trp-residue (s), and an inhibition kinetic experiment for the cellobiose substrate. The dissociation constant (K
d) and inhibitor constant (K
i) (competitive inhibition) for the GLN-βGA complex were evaluated to be 10μM and 15μM, respectively. The subsite structure of βGA was analyzed with the steady-state kinetic method. It was confirmed that the active site was composed of six subsites, affinity at subsite 2 (A
2) was the largest and subsites 4-6 had negative affinity. We tried to interpret the binding of GLN on the basis of the subsite structure, where subsite 1 carried an indispensable role in the productive binding mode. Determining the kinetic parameters for several β-glucosides as substrates, it was shown that the molar activity (k
0) and Michaelis constant (K
m) were very characteristic of the substituent species in aglycone phenyl-residue. Furthermore, the value of k
0/K
m, which reflects the productive-binding mode, strongly depends on substituent constant n (degree of hydrophobicity), suggesting that subsite 2, in which the aglycone residue is bound, is intimately related to the "hydrophobic-driven" mechanism for ES-complex formation. Further, the effect of acetonitrile (0-32.3%) on the hydrolytic reaction was examined for the cellobiose substrate. The results support the hydrophobic-driven mechanism.
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