Breeding Science
Online ISSN : 1347-3735
Print ISSN : 1344-7610
ISSN-L : 1344-7610

この記事には本公開記事があります。本公開記事を参照してください。
引用する場合も本公開記事を引用してください。

Low-cost RNA extraction method for highly scalable transcriptome studies
Kanami YoshinoRyo NishijimaTaiji Kawakatsu
著者情報
ジャーナル フリー 早期公開
電子付録

論文ID: 19170

この記事には本公開記事があります。
詳細
抄録

RNA extraction has been improved by integration of a variety of materials in the protocol, such as phenol, guanidine thiocyanate, and silica, according to the case-specific demands. However, few methods have been designed for high-throughput RNA preparation for large-scale transcriptome studies. In this study, we established a high‐throughput guanidinium thiocyanate and isopropyl alcohol based RNA extraction method (HighGI). HighGI is based on simple and phenol-free homemade buffers and the cost is substantially lower than a column-based commercial kit. We demonstrated that the quality and quantity of RNA extracted with HighGI were comparable to those extracted with a conventional phenol/chloroform-based method and a column-based commercial kit. HighGI retained small RNAs less than 200 bp, which are lost with a commercial column-based kit. We also demonstrated that HighGI is readily applicable to semi-automated RNA extraction. HighGI enables high‐throughput RNA extraction for large-scale RNA preparation with high yield and quality.

著者関連情報
© 2020 by JAPANESE SOCIETY OF BREEDING
feedback
Top