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Ali Ferjani, Naoko Ishikawa, Tetsuya Hisanaga, Ushio Fujikura, Minoru ...
Pages
702
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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In Arabidopsis several mutations that decrease cell proliferation activity often trigger excessive cell enlargement, a phenomenon that we named as compensation. However, the nature of such organ-wide coordination between cell proliferation and expansion is still obscure. We isolated and characterized six mutants
fugu1-
fugu5 and
erecta, together with
an3 and
KRP2 overexpressor, all of which exhibit compensation. Time course analysis of leaf development revealed postmitotic cell enlargement is mediated by either an increase in the rate or duration of cell expansion in
fugu2 and
fugu5, respectively. Thus, we chosed these two mutants for further analyses. As the first step of such studies, DNA microarray analysis where
fugu2 and
fugu5 were used as representatives revealed that substantially different sets of genes were affected between
fugu2 and
fugu5. Map-based cloning of
FUGU2 gene revealed that it is the
FASCIATA1 gene. We will discuss possible mechanisms of compensation based on our recent findings.
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Hideo Kuriyama, Naoko Saito, Taku Demura, Hiroo Fukuda
Pages
703
Published: 2007
Released on J-STAGE: December 13, 2007
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The analysis of cell specificity of gene expression is important to understand the state of differentiation for (particular) vascular cells. We selectively killed developing tracheary element (TE) cells in
Zinnia TE-inductive suspension culture to obtain mRNA samples from live TE-free cell population. A comprehensive gene expression analysis on such mRNA samples by DNA microarray revealed that there are significant differences in TE specificity among expression patterns of previously annotated "TE-associated" or "TE-specific" genes.
We identified putative
Arabidopsis homologs of some of these
Zinnia genes to examine their promoter activities in situ.
Arabidopsis transformants containing reporter genes fused with promoter regions of these homolog genes showed signal patterns that are compatible with above microarray data. These findings provide important insights into mechanisms of vascular cell differentiation and TE programmed cell death/autolysis.
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Chiaki Nishiyama, Haruko Ueda, Makoto Shirakawa, Tomoo Shimada, Ikuko ...
Pages
704
Published: 2007
Released on J-STAGE: December 13, 2007
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Myrosin cells in
Capparales plants are idioblasts that accumulate myrosinase, which hydrolyzes glucosinolates to produce toxic compounds for repelling pests. We previously showed that
Arabidopsis atvam3 mutants have abnormally larger number of myrosin cells. Myrosin cells are scattered along leaf veins in wild-type leaves, whereas they develop a network throughout the leaves in the mutants (1). To elucidate how myrosin cells differentiate, we analyzed
atvam3 mutants. We found that
atvam3 leaves have the distinguishably immature higher-order veins and abnormally discontinuous second-order veins. DNA microarray analysis revealed that young
atvam3 leaves down-regulated a significant number of genes that include the genes related to biosynthesis and transport of phytohormones and the genes response to phytohormones. We discuss about the involvement of phytohormones in the differentiation of myrosin cells of the leaves.
(1)Ueda et al. (2006) Plant Cell Physiol., 47,164-175
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Satoru Okamoto, Naoto Satou, Erika Kira, Tomomi Nakagawa, Izumi Hukuha ...
Pages
705
Published: 2007
Released on J-STAGE: December 13, 2007
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Leguminous plants have a systemic negative feedback regulatory mechanism called 'autoregulation' of nodulation. The gene involving in autoregulation of nodulation:
HAR1 encodes receptor-like kinase (RLK) and in a comparison of Arabidopsis RLKs, HAR1 showed the highest similarity with CLAVATA1 (CLV1). CLV1 forms a receptor complex with receptor like protein; CLV2, and negatively regulates the formation of the shoot and floral meristem via a cell-cell communication involving CLAVATA3 (CLV3) peptide. Based on CLAVATA model, there is a possibility that HAR1 forms the receptor complex with LjCLV2 and recognize LjCLV3 as its ligand in
Lotus japonicus. We found
CLV2-like sequence (
LjCLV2) and
CLV3-like sequence (
LjCLV3) from the genome of Lotus japonicus, so we generated
LjCLV2- and
LjCLV3-RNAi lines.
LjCLV2-RNAi lines showed the increase in the number of nodule, whereas
LjCLV3-RNAi lines showed fasciated shoots. These results indicate
LjCLV2 involves in autoregulation, and
LjCLV3 involves in maintenance of shoot apical meristem.
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Naoko Ishikawa, Hirokazu Tsukaya
Pages
706
Published: 2007
Released on J-STAGE: December 13, 2007
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BOP1 and
BOP2 genes (
BOP genes) are thought to regulate determinacy of leaf development in
Arabidopsis thaliana, since recessive
bop1/bop2 double mutant exhibits indeterminate growth of leaf blade. Interestingly, some wild plants exhibit indeterminate leaf morphogenesis like the
bop1/bop2 double mutant. For example, in so-called one-leaf plants, belonging to the family Gesneriaceae, one of the two cotyledons grows indeterminately.
We isolated
BOP homologs from a one-leaf plant (
Monophyllaea glabra) and a taxonomically closely related plant
Saintpaulia ionantha that develops determinate leave. To know whether those
BOP homologs are functionally conserved in
Monophyllaea and
Saintpaulia, we determined expression pattern of those homologs, and introduced those homologs under control of the 35S promoter into the
bop1/bop2 double mutant of
Arabidopsis thaliana. Based on those results, we will also discuss if the indeterminate nature of leaf in the one-leaf plants is attributable to loss (or change) of function of the
BOP genes.
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Yoko Matsumura, Hidekazu Iwakawa, Yosihisa Ueno, Chiyoko Machida, Yasu ...
Pages
707
Published: 2007
Released on J-STAGE: December 13, 2007
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ASYMMETRIC LEAVES2 (
AS2) gene encodes a plant specific protein that has cysteine repeats, conserved glycine and leucine-zipper-like sequence in the N-terminal half. Leaves of loss-of-function of
AS2 mutants have the asymmetric shape of the lamina and a malformed vein system.
AS2 is involved in development of a symmetric leaf lamina and the establishment of the leaf venation system. Although the
AS2 transcripts were detected in the root by Northern blot analysis, roots of
as2 mutants did not exhibit visible phenotypic change. To study the function of
AS2 in the root, we examined GUS activity in transgenic plants that had been transformed with a
GUS gene controlled by the
AS2 promoter. GUS expression was observed not only in the shoot apical meristem and the developing leaves but also in the root caps. We investigate the effects of mutation in
AS2 or over-expression of
AS2 on the structures of the root tips.
View full abstract
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Hiroyasu Motose, Rumi Tominaga, Takuji Wada, Yuichiro Watanabe
Pages
708
Published: 2007
Released on J-STAGE: December 13, 2007
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For better understanding of position-dependent growth process, novel Arabidopsis
ibo mutants exhibiting ectopic tip growth in hypocotyl epidermal cells were isolated. Hypocotyl epidermal cells in
ibo1 underwent ectopic tip growth at the center of the cell to form a protrusion reminiscent of root hair. Similar ectopic protrusions were observed in epidermal cells in petioles and midribs of
ibo1.
ibo1 mutations had no adverse effects on differentiation patterns of root hairs, stomata, and trichomes.
ibo1 exhibited normal expression pattern of
GL2,
CPC, and
SHV3 family. Ectopic tip growth in
ibo1 was preferentially induced in non-stomatal cell files expressing
GL2 and
CPC. Ectopic tip growth in
ibo1 was reduced by the application of ethylene-biosynthesis inhibitor, and restored by the ethylene precursor.
cpc-1 ibo1 double mutants exhibited additive phenotypes; ectopic protrusions in hypocotyls and reduced root hair formation. Possible function of IBO1 in the suppression of ectopic tip growth will be discussed.
View full abstract
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Hidekazu Iwakawa, Hiroo Takahashi, Mayumi Iwasaki, Shoko Kojima, Takes ...
Pages
709
Published: 2007
Released on J-STAGE: December 13, 2007
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Plant leaves are flat and symmetric organs and develop from a shoot apical meristem along three axes, proximal-distal, adaxial-abaxial and medial-lateral axes. The
asymmetric leaves2 (
as2) and
as1 mutants of
Arabidopsis thaliana show similar phenotypes with asymmetrical lobes along the leaf margin and with asymmetrically and downwardly curled leaves. Previously, we and other groups showed that both of
AS2 and
AS1 repress the class 1
KNOX genes,
BP,
KNAT2 and
KNAT6. To know the genes regulated by
AS2 and
AS1, microarray analysis was done. On the basis of expression profiles of wild-type,
as2-1,
as1-1,
as2-1/pAS1::AS2, which overexpresses
AS2, and
35S::AS1, 22,746 genes were classified. The levels of
BP and the genes in the same class as
BP were decreased in the
as2-1 and
as1-1 mutants and were increased in the
as2-1/pAS1::AS2 and
35S::AS1 plants. The expression of these genes may be regulated by both of
AS2 and
AS1.
View full abstract
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Manabu Kurita, Atsushi Watanabe, Toru Taniguchi, Yoshitake Fujisawa, T ...
Pages
710
Published: 2007
Released on J-STAGE: December 13, 2007
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Cryptomeria japonica is one of the most important Japanese conifer species. We consider genetic modification (GM) is a powerful tool for breeding. But the transfer of foreign genes from GM plants to related plant species by pollen has been cited as an environmental concern. For the purpose of creating male sterile GM
Cryptomeria japonica, we are trying to identify genes related to male flower formation.
To identify genes preferentially expressed during male strobilus development, we constructed 4 male strobili subtracted libraries on the basis of PCR-selected subtraction using a pool of shoot tissues as the driver and male strobili as tester. We isolated some clones from 25th November male strobili subtracted library. Sequence analysis showed that one of the clones we isolated was similar to the sunflower anther specific cell wall protein, SF18. Now we are trying to isolate male strobilus specific genes from other developmental stages.
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Shinpei Hayashi, Rumi Tominaga, Takashi Kuromori, Takuji Wada, Kazuo S ...
Pages
711
Published: 2007
Released on J-STAGE: December 13, 2007
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We isolated a recessive mutant defective in root hair elongation from RIKEN Arabidopsis
Ds transposon insertion lines. In the mutant, 15-1096-1, the tip growths of almost all root hairs are stopped and their tips are ruptured. The transposon is inserted into a gene encoding a glycosylphosphatidylinositol (GPI) -anchored protein, indicating that 15-1096-1 is allelic to the
shv3 (Parker
et al., 2000; Jones,
et al., 2006). Arabidopsis has five proteins with the same domain structure as SHV3 that seems unique to plants. Expression analysis of the corresponding genes showed their distinct and overlapping tissue distributions. The double mutant between
shv3 and disruption of the family member showed some additional phenotypes related to cell expansion and had aberrant cell wall, suggesting that SHV3 and the family members are novel players involved in cell wall organization required for the regulation of cell expansion.
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Shunsuke Miyashima, Takashi Hashimoto, Keiji Nakajima
Pages
712
Published: 2007
Released on J-STAGE: December 13, 2007
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In the root meristem (RM), stem cells surround niche cells, the quiescent center. Stem cells maintain their stemness within their niche and commence stereotyped cell division sequences. Until recently, little is known about the molecular mechanisms underlying the stem cell maintenance in RM. Previous experiments have shown that laser-ablated stem cells could be compensated for by adjacent cells. This cell invasion process often results in abnormal root cell patterns. These observations suggest that mutants defective in the root stem cell maintenance likely exhibit abnormal root cell patterning rather than retardation of root growth.
Based on this working hypothesis, we isolated several Arabidopsis mutants defective in root cell patterns. One of the mutant contained reduced number of cells in the root vascular tissue, and its causal gene was found to encode a novel protein containing WD40-motifs. We will report detailed characterization of the mutants and discuss functions of their causal genes.
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Takamitsu Waki, Takashi Hashimoto, Keiji Nakajima
Pages
713
Published: 2007
Released on J-STAGE: December 13, 2007
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We have isolated eight dominant mutants with abnormal root cell patterns using the GAL4/UAS activation tagging system. These mutants were collectively named
UAS-tagged root patterning (urp). Two of them,
urp4-1D and
urp5-1D, showed enhanced cell division in lateral root cap and epidermis. Determination of the UAS insertion sites, followed by cosegregation and recapituration analyses, indicated that the mutant phenotype was caused by ectopic expression of homologous genes encoding plant-specific transcription factor-like proteins. The URP4 recapituration lines showed severer phenotype than that of original
urp4-1D, giving rise to callus-like morphology. A callus-specific gene was found to be induced in these mutants and the
URP4 promoter was active in callus. Furthermore, expressions of other homologous genes were also elevated in the URP4- and URP5-overexpressing plants. These observations suggest that URP4 and URP5 proteins function either in enhancing cell proliferation or in repressing cell differentiation.
View full abstract
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Masahiko Furutani, Masao Tasaka
Pages
714
Published: 2007
Released on J-STAGE: December 13, 2007
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Phytohormone auxin is involved in various growth responses including axis formation during embryogenesis, organogenesis, vascular patterning, and tropism. Although auxin was the phytohormone discovered over 100 years ago, no molecular mechanisms of its biosynthesis, an essential aspect of auxin homeostasis, have been fully elucidated. To reveal the action of auxin during embryogenesis, we tried to identify the site and function of auxin biosynthesis. We analyzed expression of genes involved in Tryptophan-dependent IAA biosynthesis pathways, such as
CYP79B2,
CYP79B3,
YUCCA1,
2,
3,
4,
NIT1,
2,
3, and
AAO1. Expression patterns of these genes were tightly regulated temporally and spatially during embryogenesis. Especially,
YUCCA expression domains were identical to predicted sites of auxin biosynthesis. To elucidate the function of
YUCCA genes, we performed the phenotype analysis of
yucca mutants.
yucca mutants exhibited the defects of organ development. These results suggest that
YUCCA genes function as the origin of polar auxin transport.
View full abstract
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Satomi Hiyama, Yohei Higuchi, Kimiyo Sage-Ono, Hiroshi Kamada, Eiji Ni ...
Pages
715
Published: 2007
Released on J-STAGE: December 13, 2007
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CRES-T is a dominant and efficient gene silencing system which represses the expression of target gene and is consequently effective even in the presence of functionally-redundant transcription factors. We evaluate CRES-T as a tool for the modification of phenotypes through the production of transgenic
Pharbitis nil. In
AP3SRDX flowers, changes in phenotype was not observed. In
AGSRDX flowers, development of sepals, petals and stamens were suppressed and pistil protruded from sepals in early stage, showing not loss-of-C-class function phenotypes but loss-of-B-class function. Results of RT-PCR analysis showed that changes in expression patterns of endogenous B function genes, namely
PnAP3 and
PnPI. These results suggest that CRES-T system functions in
Pharbitis nil, while there are some variations in function of transcription factors among plant species.
This study is supported by the Research Project for Utilizing Advanced Technologies in Agriculture, Forestry and Fisheries.
View full abstract
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Soichirou Satoh, Masaaki Watahiki, Kotaro Yamamoto
Pages
716
Published: 2007
Released on J-STAGE: December 13, 2007
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Previously tissue specificity of
MSG2/IAA19 gene expression was examined by northern blot hybridization or
MSG2 promoter-
GUS reporter (Tatematsu et al., 2004). In the present study, firefly luciferase (LUC) was employed for the live tissue imaging of the
MSG2 promoter activity as well as the MSG2 protein level. The 3 kb-long
MSG2 promoter fusion of
LUC gene was stably introduced into Arabidopsis plants. An ultra-sensitive camera system revealed the luciferase images of hypocotyls which were similar to those of promoter-GUS and showed transient auxin induction of the LUC signals. Hypocotyls expressing the MSG2-LUC fusion protein showed much weaker signals than those of the promoter fusion. Signals of the protein fusion with the mutant msg2 protein were stronger than those with the wild-type protein. Auxin treatment transiently increased signals from both of the fusion proteins. We showed, for the first time, spatial and temporal expression of
Aux/IAA genes in living plants.
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Hiroyuki Ishida, Kohki Yoshimoto, Daniel Reisen, Amane Makino, Yoshino ...
Pages
717
Published: 2007
Released on J-STAGE: December 13, 2007
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A previous study demonstrated that two stromal proteins, ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) and glutamine synthetase, were released from chloroplasts into specific bodies, named Rubisco-containing bodies (RCBs), in wheat leaves. In this study, we visualized RCBs in living cells of transgenic Arabidopsis plants expressing stroma-targeted fluorescent proteins, and examined the involvement of autophagy on the accumulation and degradation of RCBs. In starved leaves treated with concanamycin A, we observed spherical bodies exhibiting GFP or DsRed fluorescence and Brownian movement in the vacuole but no chlorophyll fluorescence. Immuno-EM double-labeled with antibodies against RBCL and GFP confirmed that these fluorescent bodies correspond to RCBs. RCBs were not observed in leaves of
atg mutant (
Atatg5-1). In addition, stroma-targeted DsRed was co-localized with GFP-ATG8, which can be used as a marker for autophagosome, in spherical bodies found in the vacuole. These results indicate that stromal proteins can be degraded by
ATG-dependent autophagic process under starved conditions.
View full abstract
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Shinya Wada, Hiroyuki Ishida, Kohki Yoshimoto, Yoshinori Ohsumi, Amane ...
Pages
718
Published: 2007
Released on J-STAGE: December 13, 2007
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During leaf senescence, the degradation of chloroplast proteins represents one of the nitrogen translocation mechanisms. Rubisco accounts for 12-35% of total leaf nitrogen and is the main source for nitrogen translocation. In wheat and barley, Rubisco content decreases much faster than the number of chloroplast. Therefore, it is thought that Rubisco is either degraded within chloroplasts, or by autophagy-like transport pathway via RCBs (
Rubisco-
containing
bodies), or both. In this study, we analyzed changes in Rubisco, leaf nitrogen, chlorophyll contents and chloroplasts number during leaf senescence in wild-type
Arabidopsis and autophagy defected mutant,
Atatg4a4b-1.
The amount of Rubisco, leaf nitrogen and chlorophyll decreased equally in both
Atatg4a4b-1 and in the wild-type, until 80% of Rubisco was decreased. Subsequently,
Atatg4a4b-1 senesced faster than wild-type. However, the chloroplast number remained stable until the majority of Rubisco was degraded. As the result,
Atatg4a4b-1 mutant retained the equivalent potential to degrade chloroplast proteins to wild-type.
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Yutaka Asada, Tomokazu Tsutsui, Masako Yamamoto, Akira Ikeda, Junnji Y ...
Pages
719
Published: 2007
Released on J-STAGE: December 13, 2007
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To clarify the processes involved in plant immunity, we have isolated and characterized
Arabidopsis mutant,
cad1, which shows a phenotype that mimics the lesions seen in the hypersensitive response. Inoculation of
cad1 mutant plants with virulence pathogen shows that the
cad1 mutation results in the restriction of bacterial growth (
Plant Cell Physiol. 2005, 46: 902-912). The mutant enhances gene expression of the plant defensin 1.2 which is related to the plant defense pathway regulated by ethylene and jasmonic acid (JA). The mutant leaded to increase in content of JA, while did not show overproduction of ethylene. All the results suggest that resistance to the pathogen in the mutant is associated to the genes of ERF protein which controls ethylene-responsive genes. Microarray analysis using the
cad1 mutant revealed some gene for the
ERF genes which are likely involved in plant defense. Characters of the
ERF genes will be reported.
View full abstract
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Ryoko Mitsui, Mami Kubota, Masayoshi Inoue, Masanobu Mino
Pages
720
Published: 2007
Released on J-STAGE: December 13, 2007
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The cell line GTH4 was generated from the F
1 hybrid of
Nicotiana gossei x
N. tabacum which reveals lethality at seedling stage. The cells proliferated at 37 C but died at 26 C. Inhibitor treatments suggested that cell death depends on expression of genes in the cell at 37 C. The mutant cell line GTH4S does not die, suggesting that GTH4S does not express the genes which are involved in the cell death. Accordingly, it was worth comparing the differences in the genes expressed between GTH4 and GTH4S. To find out the genes involved in the cell death process, 100 x 10
3 cDNA clones of GTH4 have been analyzed by differential screening using cDNA probes prepared by RNA of GTH4 or GTH4S. Three clones which were specific to GTH4, NADH dehydrogenase subunit 1 of
N.tabacum and two genomic sequences of chloroplast of Solanaceae plants, were found.
View full abstract
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Yuping Zhou, Takahiro Fujibe, Xiaolan Wang, Huizhen Cheng, Kotaro T. Y ...
Pages
721
Published: 2007
Released on J-STAGE: December 13, 2007
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We have been carrying out phenotypic characterization of two T-DNA insertion lines of the
IQM1 gene available in the Salk T-DNA library. The
IQM1 gene consists of 9 exons, and its product contains an IQ motif to which calmodulin binds in the absence of calcium ion. T-DNA inserted in the first exon and the 6th intron of
IQM1 in
iqm1-1 and
iqm1-2, respectively. RT-PCR analyses showed that the
IQM1 mRNA was not transcribed downstream of the insertion site in either mutant. Both mutant seedlings displayed shorter primary roots than wild type. Though
auxin response factor (
arf)
8-1 (Tian et al., 2004) is normal in root growth, introduction of the
arf8-1 mutation into
iqm1-2 inhibited root growth further. RT-PCR analyses showed that
IQM1 was light-inducible, and that it was also positively regulated by ARF8 in the dark. These results suggest that IQM1 is involved in light, auxin and calmodulin signaling.
View full abstract
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Yoshiharu Fujii, Mami Sugano, Ken Hashizume, Syuntaro Hiradate
Pages
722
Published: 2007
Released on J-STAGE: December 13, 2007
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We have developed a new bioassay named Dish Pack Method for analyzing volatile allelochemicals. In this method, leaves of plants were put into one of the holes in a 6-well-multi-dish. Each side of the multi-dish was sealed and put in incubator. The growth of test plants was measured after 4 days. It is possible to analyze the internal volatile gas collected from the hole with gas-tight-syringe through the septum set up on the holes. Volatile compounds from these test plants were analyzed by GC-MS. From Leguminosae and Papaveraceae plants, carbonyl compounds (
trans-2-hexenal and
cis-3-hexenol) were identified as major compounds. From Compositaea and Labitaea, monoterpenoids (α-Pinene, Limonene, Myrcene et al.) were mainly identified. Spider flower (
Cleome spinosa) contained strong volatile allelochemical. Methyl isothiocyanate (MITC) was identified in Spider flower by GC-MS. MITC was released from injured leaves. Volatile allelopathic activity of
Cleome cultivars were also evaluated.
View full abstract
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Mami Sugano, Ken Hashizume, Hisao Hirai, Syuntaro Hiradate, Yoshiharu ...
Pages
723
Published: 2007
Released on J-STAGE: December 13, 2007
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Allelopathic activities of newly introduced plants were evaluated using Sandwich method (for root exudates) and Plant Box method (for leaf leachates).
By Sandwich method, more than 1000 samples ware compiled and the results obtained using 10mg of leaves in 10cm
2 shows the normal distribution. Sorghum, Oxalis, and Rosaceae family showed strong inhibitory activity.
By Plant Box method,
Clarkia unguiculata, Gypsophila paniculata, Oenothera hookeri, Trifolium incarnatum, Ipomopsis rubra, Silene armeria, Avena strigos and,
Anisantha madritensis showed strong inhibitory activity. Allelopathic activity of
Astragalus sinicus, known as Chinese milk vetch was weak, but we found prominent inhibitory activity in newly introduced
Astragalus.
View full abstract
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Mineko Konishi, Shuichi Yanagisawa
Pages
724
Published: 2007
Released on J-STAGE: December 13, 2007
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Members of plant-specific Dof transcription factors have been suggested to play various roles in growth and development and in the responses to phytohormones and environmental signals in various plant species.
Arabidopsis has 36 members of Dof transcription factors but analyses of a limited number of them have been reported so far. We have characterized the expression and the function of a member of Dof proteins of
Arabidopsis. The
GUS reporter gene under the control of the promoter of the
Dof gene was expressed in the precursor cells of vasculature, procambium, in embryo, leaf primordia and root tips. Overexpression of the
Dof gene caused the interruption of vascular network in cotyledons and true leaves. In severe cases, the overexpressing plants developed curled-up leaves. These results suggest the involvement of the Dof protein in vascular development in
Arabidopsis.
View full abstract
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Issei Oba, Masahiro Inouhe
Pages
725
Published: 2007
Released on J-STAGE: December 13, 2007
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The light irradiation strongly inhibits growth of mesocotyl in dark-grown maize seedlings. We previously reported that white-light illumination caused a decrease in the contents of water and reduced form glutathione (GSH) in maize mesocotyls, suggesting their possible roles in the growth inhibition by light. In the present study, we examined effects of humidity and the GSH synthesis inhibitor BSO on the growth and GSH levels in maize mesocotyls. Under high humidity conditions in closed chambers, BSO (200 μM) caused a 25-33% growth inhibition and 37-45% decrease in GSH levels in 4-day-old mesocotyls. However, under these conditions, light caused very little growth inhibition in the presence or absence of BSO. These results suggested that water rather than GSH contents has a critical role in the growth inhibition of mesocotyls by light. GSH level might be changed as a result of water loss or concomitant cell damage by light.
View full abstract
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Madoka Ayano, Tadao Asami, Syouzou Fujioka, Shigeo Yoshida, Yukihisa S ...
Pages
726
Published: 2007
Released on J-STAGE: December 13, 2007
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It has reported that the Brassinosteroids (BRs) function as a positive regulator of photomorphogenesis unexpectedly. To understand true functions of BRs, we analyzed expression levels of BR-related 4 genes (
DWF4,
BR6ox2,
BR6ox1and
SAUR-AC1) by real-time-quantitative (RTQ)-PCR in Arabidopsis etiolated seedlings. An etiolated seedling of
Arabidopsis thaliana. consists of a long hypocotyl, a hook, and closed cotyledons. When the seedlings were exposed to light, the hypocotyl elongation was inhibited. At the same time, the hook started to unfold and cotyledons started to develop 3-6 hours after the treatment. Prior to the hook unfolding, expressions of all the four genes were strongly induced. In cotyledons, the expression of
BR6ox2,
DWF4,
SAUR-AC1 were activated throughout 24hours. These results suggested that the hook opening and cotyledon development were induced by the BRs synthesized de novo. On the other hand, hypocotyls elongation may be controlled in more complex regulatory manners.
View full abstract
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Iichiro Umemura, Ayako Nakamura, Kenji Gomi, Hidemi Kitano, Makoto Mat ...
Pages
727
Published: 2007
Released on J-STAGE: December 13, 2007
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Even after various physiological experiments, the molecular mechanism of auxin signaling in monocotyledonous plants remained unclear. To understand the function and mechanism of auxin signaling in rice, we focused on the IAA gene, a well-studied gene in Arabidopsis that serves as a negative regulator of auxin signaling. We found 24 IAA gene family members in the rice genome. OsIAA3 is one of the members whose expression is rapidly increased in response to auxin. We produced transgenic rice harboring mOsIAA3-GR, which can overproduce mutant OsIAA3 protein containing an amino acid change in domain II to cause a gain-of-function phenotype by treatment with dexamethasone. The transgenic rice was insensitive to auxin and gravitropic stimuli, and exhibited short leaf blades, reduced crown root formation, and abnormal cell arrangement in shoot-apical meristem. These results suggest that auxin is important for rice development and its signaling is mediated by the IAA genes in rice.
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Yusuke Jikumaru, Masayo Sekimoto, Atsushi Hanada, Shinjiro Yamaguchi, ...
Pages
728
Published: 2007
Released on J-STAGE: December 13, 2007
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Plant hormones have been known as signal compounds which regulate various responses at a low concentration in plants. To reveal the system, endogenous level of them had been quantified mainly by using GC-ESI-MS. Recently, microanalysis by using LC-ESI-MS/MS have been carried out frequently. In this method, samples do not require complicated purification and derivatization that GC-EI-MS requires. However, because ionization efficiency in LC-ESI-MS/MS method is susceptible to impurities, it requires suitable purification.
Our objective is that establishment of method for comprehensive analysis of all plant hormones. Here we report the method for analysis of gibberellin, abscisic acid, indole-3-acetic acid, jasmonic acid and salycilic acid. In our method for each hormone, required amount of plant material is 1/1000 to 1/10 to that of GC-EI-MS analysis and it requires no HPLC purification.
We will also report the analysis of other hormones and the comprehensive analysis from 100 mg of plant material.
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Akitomo Nagashima, Genki Suzuki, Kensuke Saji, Takeshi Kuroha, Noriko ...
Pages
729
Published: 2007
Released on J-STAGE: December 13, 2007
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Photoreceptors, phytochromes and cryptochromes regulate hypocotyl growth under specific conditions by suppressing negative-gravitropism, modulating phototropism and inhibiting elongation. Although those effects seem to be partially caused via the regulation of the phytohormone auxin, the underlying molecular mechanisms are still poorly understood. Here we demonstrate that photoreceptors in Arabidopsis have at least two distinct effects: the inhibition of straight growth of hypocotyl depending on the ABC-type auxin transporter PGP19 and the induction of differential growth of hypocotyl independently of PGP19. Our genetic and gene-expression analyses reveal that the components involved in auxin transport, PGP19, is the suppressor of the straight growth in hypocotyl, and that activation of phytochromes and cryptochromes reduce the PGP19 expression and suppresses the basipetal auxin transport in hypocotyls. These results suggest that the control of auxin transport by phytochromes and cryptochromes is a critical component of the regulation of hypocotyl growth in response to light.
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noriko hashiba, Kyoko Toyofuku, Sachiko Takahashi, Atsushi Ogawa, Hiro ...
Pages
730
Published: 2007
Released on J-STAGE: December 13, 2007
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The
6b gene is one of the tumourigenic genes of Agrobacterium tumefaciens, and causes morphological alterations, and reduced polar auxin transport. To investigate the relationship between endogenous auxin localization and cotyledonous morphology, we introduced to tobacco the AK-
6b gene under the control of dexamethasone (Dex) inducible promoter. The seeds of T1 generation were sowed on MS medium containing Dex, and the seedlings were collected over time. Tissue sections were made and subjected to anatomical study or treated with the monoclonal antibody against indoleacetic acid (IAA). Analysis of the transverse sections indicated that the morphological alteration was recognized on the abaxial side of the cotyledons at 7 days after sowing. IAA was found to be equally distributed over cotyledons as long as 5 days. However, preferential localization was recognized on the abaxial side at 6-7 days. Therefore, it is suggested that the morphological alterations and the auxin localization are closely associated.
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Mikiko Makino, Nanae Ueda, Kentaro Takei, Hirokazu Komatsu, Noriyuki T ...
Pages
731
Published: 2007
Released on J-STAGE: December 13, 2007
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Plant hormones play an important role as signaling molecules in the regulation of almost all phases of plant development, from seed germination to senescence. They regulate expression of genes via each signal transduction systems, and in most cases they mutually regulate the signaling and metabolic systems between the hormones. Such complicated regulatory systems enable plant to grow and develop normally. To understand the fine regulatory systems at molecular and hormonal levels, we have established a method for high-throughput analysis of major plant hormones, namely, cytokinins, auxins, abscisic acid, and gibberellins. Our method needs 10 to 100 mg fresh weight of plant tissues for determination and enables us to analyze 96 samples at a time. Using our method, we started to analyze FOX hunting Arabidopsis lines overexpressing rice full-length cDNA. We will present the analyzed data and discuss the correlation between the morphological phenotypes of the FOX lines and hormone profiles.
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Satoshi Iuchi, Hiroyuki Suzuki, Young-Cheon Kim, Atsuko Iuchi, Takashi ...
Pages
732
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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Three receptor genes (
AtGID1a, AtGID1b, and AtGID1c) for a phytohormone gibberellin (GA) exist in Arabidopsis genome. The AtGID1s proteins are able to bind with GA, and the over-expression of each AtGID1s gene could complement dwarf phenotype of rice GA-receptor mutant gid1-1. In this study, we elucidate the function of AtGID1s using T-DNA and Ds insertion mutants obtained from RIKEN GSC and ABRC. We could not detect obvious phenotypic change in the homozygous single mutants (atgid1a, atgid1b, atgid1c) suggesting that the function of AtGID1s is highly redundant. Thus we established double mutants (atgid1ab, atgid1ac, and atgid1bc) to detect any functional difference. The phenotypes of double mutants including germination, stem elongation, flowering and seed development are examined. The result of crossbreeding experiment to establish triple mutant (atgidabc) will be also reported.
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Toshiyuki Ohnishi, Simona Bancos, Bunta Watanabe, Shozo Fujioka, Takao ...
Pages
733
Published: 2007
Released on J-STAGE: December 13, 2007
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Brassinosteroids (BRs) are plant steroid hormones that are essential for normal plant growth and development. Cytochrome P450 monooxygenases (P450s) play crucial roles in BR biosynthesis from campesterol to brassinolide. Recent molecular genetic studies for BR-deficient mutants of Arabidopsis, rice, tomato and garden pea have identified several P450 genes (
CYP85A, 90A, 90B, 90C, 90D, and
724B) so far. Recently, we have characterized Arabidopsis CYP90C1 and CYP90D1 functionally expressed in insect cells and found that CYP90C1 and CYP90D1 are redundant C-23 hydroxylases. Here, we report biochemical characterization of a P450, C-3 oxidase. The P450 was expressed in insect cells using a baculovirus expression system. The P450 activity was measured in an
in vitro assay and the reaction products were analyzed by GC-MS. These results indicated that the P450 is BR C-3 oxidase. To our knowledge, this is the first report of the biochemical characterization of the C-3 oxidation by the P450.
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Satoshi Matsuo, Kaori Kikuchi, Machiko Fukuda, Ichiro Honda
Pages
734
Published: 2007
Released on J-STAGE: December 13, 2007
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In cultivation of tomato, several environmental stresses are the important factors to affect quality and yield of fruit. Abscisic acid (ABA) is known to play important roles in many stress responses of plants. In this study, we investigate how the endogenous ABA levels are regulated in stress responses of tomato, and try to manipulate their content by transgenic approach.
It is well known that ABA 8'-hydroxylase (CYP707A) and 9-
cis-epoxycarotenoid dioxygenase (NCED) are important for the regulation of ABA levels. So we try to analyze the expression patterns of four ABA 8'-hydroxylase genes (
LeABA8'h1-4) and two NCED genes (
LeNCED1-2) in stress responses of tomato. And we found that
LeNCED1,
LeABA8'h1 and
LeABA8'h2 play major roles in the regulation of ABA levels under water stress conditions.
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Tomoko Kaneyasu, Akie Kobayashi, Mayumi Nakayama, Nobuharu Fujii, Hide ...
Pages
735
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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Plants are sessile in nature, and need to detect and respond to many environmental cues in order to establish their stand. Plants can sense environmental signals and display tropisms, and it is widely accepted that auxin plays an important role in these responses. Recent analyses using
Arabidopsis have emphasized the importance of polar auxin transport and differential auxin responses to gravitropism. Nonetheless, the involvement of auxin in hydrotropism remains unclear. To clarify whether or not auxin is involved in the hydrotropism, we treated
Arabidopsis seedlings with inhibitors of auxin influx, efflux, and response, and examined their effects on both hydrotropic and gravitropic responses. In agreement with previous reports, gravitropism was inhibited by all the chemicals tested. In contrast, only an inhibitor of the auxin response significantly reduced hydrotropism. These results suggest that auxin response, apart from its polar transport, plays definite role in hydrotropic response.
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Hironori Takaji, Takashi Okamoto, Seiji Tsurumi
Pages
736
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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Auxin (IAA) plays an important role in lateral root formation and gravitropism in roots. The AUX1 protein has been shown to act as an auxin (IAA) influx carrier by its expression in
Xenopus oocytes. (Yang et al, 2006) However, it is difficult to measure AUX1 uptake directly in intact plants, because apparent
3H-IAA uptake obtained by scintillation counter contains additional factors:
3H-IAA absorbed in cell wall and uptake by diffusion. For this reason, simple method for estimating net
3H-IAA uptake has been awaited for a long time.
Here, we wish to show a new methodology to calculate net
3H-IAA uptake in intact plants: we have estimated the amount of
3H-IAA absorbed in cell wall and uptake by diffusion on the basis of the individual pH dependency.
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Masaru Nakata, Tomoko Santo, Takeshi Ito, Sarahmi Ishida, Tsuyoshi Fur ...
Pages
737
Published: 2007
Released on J-STAGE: December 13, 2007
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RSG is a transcriptional activator that regulates endogenous amounts of GAs. Function of RSG is regulated by subcellular localization, which is controlled by endogenous amounts of GAs through phosphorylation of Ser-114. We have identified tobacco calcium-dependent protein kinase (NtCDPK) as a protein kinase that specifically phosphorylates Ser-114 of RSG. Although CDPK family consists of many CDPK isoforms and the target sequences of CDPKs are conserved, the mechanisms of isoform-specific substrate specificity have not yet been known. NtCDPK1 but not NtCDPK2 phosphorylates Ser-114 of RSG, indicating RSG is an NtCDPK1-specific substrate. To clarify the mechanisms of substrate specificity of NtCDPK1, we performed pull-down assay using deletion mutant series of NtCDPK1 and identified Arg-10 in N-terminal variable domain as a key residue for binding to RSG. Furthermore, mutation of Arg-10 by alanine substantially decreased its kinase activity for phosphorylation of RSG Ser-114.
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Tomo Yoshida, Noriyuki Nishimura, Hirohumi Kuroda, Minami Matsui, Kazu ...
Pages
738
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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The phytohormone abscisic acid (ABA) regulates physiologically important developmental processes and stress responses. Previously, we reported on Arabidopsis L. Heynh.
ahg mutants, which are hypersensitive to ABA during germination and early seedling growth. Among them, we found that
AHG1 and
AHG3 are identical to
At5g51760 and
AtPP2CA, respectively, which encode protein phosphatase 2Cs (PP2C). We demonstrated physiologically AHG1 and AHG3 function as negative regulators of the ABA signaling during seed germination. Multiple PP2Cs are known to be negative regulators of the ABA signaling, but the precise molecular function of these proteins are not elucidated because of luck of information about physiological substrates. In the past, some PP2C-interacting proteins have been isolated by mainly yeast two-hybrid system. We are trying to identify the targets of AHG1 and AHG3/AtPP2CA by some proteomic approaches such as the two-dimensional electrophoresis and the pull down assay. We will show the progress of these attempts.
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naoko sato, mariko oka, hideyasu hujiyama
Pages
739
Published: 2007
Released on J-STAGE: December 13, 2007
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We have already reported that abscisic acid (ABA) promoted chlorophyll accumulation in cucumber plants under low nitrogen conditions. In this study, we focused on the effect of ABA on the accumulation of aminolevulinic acid (ALA) under low nitrogen conditions since ALA is a key compound in the pathway of chlorophyll biosynthesis. The total amount of ALA was increased by ABA treatment, especially in cotyledon, as ABA treated period was longer. And ALA suppressed the reduction in the total amount of chlorophyll in cucumber cotyledons and promoted the chlorophyll accumulation in the first leaves under low nitrogen conditions. These results suggest that ABA promotes ALA biosynthesis, resulting in chlorophyll accumulation in cucumber plants. In addition, ABA promoted nitrate reductase activity under low nitrogen conditions, but ALA did not. Consequently, ABA promotes not only ALA biosynthesis but also nitrate reductase activity in cucumber plants grown under low nitrogen conditions.
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Atsushi Sakai, Kayo Nishio, Aya Miura, Yu Sawai, Mari Takusagawa
Pages
740
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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When tobacco BY-2 cells are grown in the standard culture medium that contains auxin, they proliferate rapidly but remain small and undifferentiated. However, when they are grown in a modified culture medium that contains cytokinin instead of auxin, they hardly proliferate but become large and develop amyloplasts. For the BY-2 cells grown in the modified medium, we also observed 1) increased secretion activities accompanied by an increase in the number of dictyosomes per cell, 2) appearance of specific secreted proteins in the medium, 3) weaker cell-to-cell adhesion, and 4) earlier and more frequent cell death. These characteristics of BY-2 cells grown in the modified medium apparently resemble to, at least in part, those of cells within a root cap. To access this idea, we are now further examining the behavior of BY-2 cells in the modified medium in detail, especially secretion activity and mode of cell death.
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Hiroshi Tahara, Etsuo Yokota, Hisako Igarashi, Hidefumi Orii, Toshio S ...
Pages
741
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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We have previously found that two types of clathrin signals, dot and diffuse, located in mitotic spindle in BY-2 cells stained with an antibody against clathrin heavy chain. In the present study, we analyzed the live image of BY-2 cells expressing YFP-clathrin light chain. Dot signals were observed around spindles. In addition, diffuse signals were also observed on spindle. Analyses were carried out in BY-2 cells expressing both C-terminal region of clathrin heavy chain and GFP-tubulin. The metaphase was significantly prolonged and the spindle became aberrant during the anaphase. These results suggested that clathrin is involved in stabilizing the mitotic spindle.
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Hirofumi Harashima, Atsuhiko Shinmyo, Masami Sekine
Pages
742
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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A loss-of-function mutation in
CDKA;1, encoding the only
Arabidopsis CDKA, results in male gametophyte lethality, because the second division of the generative cell, pollen mitosis II (PMII), is disrupted in this
cdka-1 mutant. Although almost all mature pollen grains of wild type
Arabidopsis were tricellular, those of heterozygous
cdka-1/CDKA plants contained bicellular and tricellular at about a 1:1 ratio. About 25% tricellular pollen grains were recovered when the wild type
CDKA;1-GFP was heterozygously introduced into
cdka-1/CDKA plants, implying that the
CDKA;1-GFP was functional in the PMII cell division. In this study, the
CDKA;1 mutants were introduced into
cdka-1/CDKA plants. As with the result of wild type
CDKA;1-GFP, introduction of
CDKA;1(T161E)-GFP, which can mimic phosphorylated T161, resulted in successful complementation in the
cdka-1 mutant. However, introduction of
CDKA;1(T161A)-GFP did not complement the
cdka-1 mutant, indicating that phosphorylation of T161 in
Arabidopsis CDKA;1 is required for the PMII cell division.
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Chika Akagi, Takeshi Yoshizumi, Mieko Higuchi, Hirofumi Kuroda, You Ho ...
Pages
743
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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Endoredulication is one of cell cycle that increases ploidy without mitosis. The molecular mechanisms that controls endoreduplication are poorly understood. To reveal this, we isolated several dominant mutants that increase polyploidy from Arabidopsis activation tagging lines using flow-cytometer.
increased level of poliploidy2-D (
ilp2-D) was one of the mutants that showed increased polyploidy in both light-grown and dark-grown seedlings compared with the wild-type. To examine
ILP2 function, we isolated two T-DNA insertional mutants. The both mutants reduced ploidy level in light-grown 20-day-old first leaf cells. We observed
in vivo localization with ILP2 protein fused to GFP. That revealed that ILP2 protein localized in chloroplasts.
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Hiroko Hara, Takeshi Yoshizumi, Yuko Tsumoto, Takanari Ichikawa, Hiroa ...
Pages
744
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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Endoreduplication is a special cell cycle containing DNA replication in the absence of mitosis. In higher plants, it is known that endoreduplication affects its morphogenesis because increases in the ploidy are often related to cell size. But, little is known about the molecular mechanism.
To reveal this mechanism, we analyzed a
Arabidopsis mutant,
increased level of polyploidy4-D (
ilp4-D), which was isolated from activation tagging lines.
ilp4-D showed increased polyploidy in the seedlings.
ILP4 gene encodes a protein that contains a kinase domain. Histochemical analysis using a
ILP4 promoter-GUS reporter gene showed GUS activity in root, cotyledon and hypocotyls, suggesting
ILP4 expression has tissue specificity.
T-DNA insertion lines of
ILP4 were did not show any obvious phenotype. There are two
ILP4 homologue,
ILP4L1 and
ILP4L2, in
Arabidopsis.
ILP4 and
ILP4L1 double mutant showed decreased polyploidy level in dark seedlings. These results indicated ILP4 and ILP4L1 promote endocycle.
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Hiroaki Hongo, Hiroko Hara, Takeshi Yoshizumi, Yukako Hasegawa, Yoko H ...
Pages
745
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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Endoreduplication is a special cell cycle defined as the replication of DNA without cell division.
In plant, this phenomenon is often observed in various tissues, and it controls organ size and development.
Because the molecular mechanism of endoreduplication is poorly understood,
we screened novel endoreduplication mutants to make clear this mechanism in Arabidopsis.
In previous study, 17 mutants that increased of DNA content have been isolated from Activation Tagging lines. But the Activation Tagging lines have the problem that is difficult to find the corresponding gene.
Therefore, we tried new screening that used the Fox lines, which is over expression Arabidopsis full length cDNA transformants, and it is easy to find the gene that cause increasing of ploidy.
We screened 1,215 Fox lines by a Flowcytometer, resulted in 23 mutant candidates showing increased polyploidy.
Here we report the screening and the phenotypes of mutants.
View full abstract
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Takamasa Suzuki, Shingo Nishimura, Yasunori Machida
Pages
746
Published: 2007
Released on J-STAGE: December 13, 2007
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Plant cytokinesis is accomplished with the formation of phragmoplast, which is formed between two daughter chromatins during anaphase of mitosis. The development of phragmoplast is shown to be regulated by the MAP kinase cascade. Although the MAP65, one of microtubule binding protein, was recently shown to be phosphorylated by MAPK, however, most of targets are unidentified. We applied the phosphoprotein purification with immobilized metal ion affinity chromatography and two-dimensional difference in gel electrophoresis for the identification of the phosphorylated targets of MAP kinase cascade in
Arabidopsis. We identified PATL2, GAPD, lectin like protein as candidate of target of MAP kinase and found that some of them were phosphorylated by MAPK
in vitro. The PATL2 is a member of SEC14 family protein and speculated to be involved in membrane trafficking. These results suggest that MAPK cascade regulate membrane trafficking concomitant with expansion of phragmoplast.
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Hiroki Sugimoto, Kensuke Kusumi, Ko Noguchi, Masahiro Yano, Atsushi Yo ...
Pages
747
Published: 2007
Released on J-STAGE: December 13, 2007
CONFERENCE PROCEEDINGS
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Guanylate kinase (Gmk) is a central enzyme in guanine nucleotide metabolism pathways, catalyzing the phosphorylation of (d)GMP to (d)GDP. The biochemistry, genetics, and regulation of Gmks in animals and microorganisms is well documented. However, little is known about enzymatic and signaling role of Gmk in higher plants. The rice
virescent 2 (
v2) mutant is altered in chloroplast differentiation and develops chloroplast-deficient leaves. Previously we isolated
V2 gene by positional cloning and revealed that
V2 gene (designated as
mGmk) encodes a mitochondria-localized Gmk. While there are many reports of cytosolic Gmk in eukaryotes, much less is known of mGmk. Our data indicate that the mGmk is essential for chloroplast development. Rice has another Gmk gene (
OGK1) encoding cytosolic Gmk. Moreover, Arabidopsis also has two types of enzymatically active Gmks. Through the comparison of these two
Gmk genes, the functional significance of mGmk in mitochondria will be discussed.
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Nanae Shibutani, Hatsumi Nozue, Kenji Suzuki, Hiromitsu Nakanishi, Yas ...
Pages
748
Published: 2007
Released on J-STAGE: December 13, 2007
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The reorganization of thylakoid membranes of Arabidopsis thaliana during growth was reported at this annual meeting last year. We report here a similar morphological alteration in the thylakoid that occurs reversibly depending on light intensity. Three light conditions of 50-60(++), 25-30(+), 110-130(+++) μmol m-
2sec-
1 were set up. After having been grown in (++) light for 4 weeks, some plants were placed in (+), then back to (++). Through this management, the structure of thylakoid membranes was changed from "linear" to "curly", then back to "linear". The "curly" thylakoid is also observed in leaves of 8-10 week old plants grown under the (++) condition. When these plants were moved from (++) to (+++), and then back to (++), a fluctuation in the opposite direction, from "curly" to "linear" then back to "curly" was observed. Both types of photo-stimulated alterations were accompanied by a change in the chlorophyll a/b ratio.
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Hideki Takanashi, Shin-ichi Arimura, Nobuhiro Tsutsumi
Pages
749
Published: 2007
Released on J-STAGE: December 13, 2007
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The mitochondrial genomes of higher plants are larger and more complex than those of other organisms. The fine structure of the mitochondrial genomes of higher plants is still not well characterized.
To determine the size of the DNA molecules which constitute mitochondrial genome of Arabidopsis thaliana, we tried to visualize mitochondrial DNA (mtDNA) by using YOYO-1. After the isolation of mitochondria from Arabidopsis thaliana by Percoll density gradients centrifugation, we put the mitochondria on a slide glass, burst them, and stained extended mtDNA fiber by YOYO-1. We observed circular and linear mtDNA. A standard curve of size (kbp)-to-μm was made with bacterial artificial chromosomes. We estimated the size of DNA (in kbp) from μm using this equation. The sizes of mtDNA varied. Surprisingly, we found the DNA molecule that was about twice as long as the entire mitochondrial genome of Arabidopsis thaliana.
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Yukihiro Kabeya, Hiromichi Suzuki, Mamoru Sugita
Pages
750
Published: 2007
Released on J-STAGE: December 13, 2007
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In general, the core subunits of a bacterial-type plastid RNA polymerase (PEP) are encoded by the plastid
rpoA,
rpoB,
rpoC1 and
rpoC2. However, an
rpoA gene is absent from the moss
Physcomitrella patens plastid genome but the nuclear counterparts,
PpRpoA1 and
PpRpoA2, are present in the nuclear genome. In the present study, we investigated differential expression of
PpRpoA1 and
PpRpoA2 in the protonemata grown under different light and dark conditions. The expression of
PpRpoA2 was regulated in a light-dependent manner while
PpRpoA1 was expressed at constant levels under different light/dark conditions. Disruption of
PpRpoA1 gene resulted in the increase of
PpRpoA2 transcript level. In addition, the transcript levels of several plastid genes significantly altered in the dark-adapted
PpRpoA1 disruptant. We are currently investigating whether such a significant alteration of the transcript levels is caused by changes of transcription activity or mRNA stability.
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Kimihiro Terasawa, Masaki Odahara, Yukihiro Kabeya, Tatsuhiko Kikugawa ...
Pages
751
Published: 2007
Released on J-STAGE: December 13, 2007
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The birth of land plants is an important step in plant evolution. Here, we report the complete nucleotide sequence (105,340 bp) of the circular mitochondrial genome of the moss
Physcomitrella patens. This genome, being the smallest among the sequenced mitochondrial genomes of land plants reported to date, contains genes encoding three rRNAs, 24 tRNAs and 42 conserved mitochondrial proteins. The overall structure of mitochondrial genome is essentially similar in
P. patens, Chara vulgaris, Chaetosphaeridium globosum and
Marchantia polymorpha, but poor synteny with these was detected in green algae and angiosperms. Phylogenetic analysis using 18 conserved proteins suggested that the moss-liverwort clade is sister to angiosperms. Available evidence suggests that multipartite structure of mitochondrial genome as found in flowering plants does not occur in
Physcomitrella. All these data suggest that the mitochondrial genome of
Physcomitrella retains prototype features among land plant mitochondrial genomes.
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