X-ray Structure Analysis Online
Online ISSN : 1883-3578
ISSN-L : 1883-3578
Volume 29
Displaying 1-25 of 25 articles from this issue
Part 1
Part 2
Part 3
Part 4
  • Kuldeep SINGH, Inderjeet KOUR, Gurpreet KOUR, Renu SACHAR, Vivek K. GU ...
    2013 Volume 29 Pages 15-16
    Published: 2013
    Released on J-STAGE: April 20, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    A six-coordinated Ni(II) complex, bis(O-propylxanthato)bis(3-chloropyridine)nickel(II), [Ni(C5H4NCl)2(S2COC3H7)2], has been synthesized by the reaction of bis(O-propylxanthato)nickel(II) with 3-chloropyridine in acetone. The structure of the title compound was elucidated by a single-crystal X-ray diffraction method. The compound crystallizes in the monoclinic space group P21/c with unit-cell parameters: a = 9.4079(1), b = 10.7323(2), c = 11.7498(2)Å and β = 96.443(1)°. The crystal structure was solved by direct methods and refined by full-matrix least-squares procedures to a final R-value of 0.023 for 2064 observed reflections. The asymmetric unit comprises half a molecule and the nickel(II) cation lies on an inversion centre. The pyridine ring is coplanar, and is held almost perpendicular to the dithiocarbonato group. Molecules in the crystal are packed together to form layers, which appear to extend diagonally along the ac-plane.
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  • Reiji SUDO, Daisuke YOSHIOKA, Masahiro MIKURIYA, Hiroshi SAKIYAMA
    2013 Volume 29 Pages 17-18
    Published: 2013
    Released on J-STAGE: April 20, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The nickel(II) complex [Ni(DMSO)6](BPh4)2 (DMSO = dimethylsulfoxide) [hexakis(dimethylsulfoxide-κO)nickel(II) bis(tetraphenylborate)] was prepared, and characterized by a single-crystal X-ray method. The compound crystallizes in the triclinic space group P1 and Z = 1 with cell parameters a = 12.4224(17)Å, b = 12.5588(18)Å, c = 12.9099(18)Å, α = 61.745(2)°, β = 89.999(2)°, γ = 63.942(2)°, V = 1537.8(4)3. Six DMSO molecules coordinate to a nickel(II) center to form a [Ni(DMSO)6]2+ cation. In the present crystal, the DMSO molecules are disordered, and two conformers of [Ni(DMSO)6]2+ were found to be superimposed. The NiO6S6 units in both conformers are approximated by an S6-propeller-like structure; however, in conformer A, the Ni(DMSO)4 unit in the complex cation is approximated by an S4-propeller-like structure, and tetragonal elongation is observed along the pseudo-S4 axis; while in conformer B, the whole structure is approximated as an S6-propeller-like structure, and a trigonal compression is observed along the pseudo-S6 axis.
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Part 5
  • Neerupama SHARMA, Kuldeep SINGH, Renu SACHAR, Vivek K. GUPTA, Rajnika ...
    2013 Volume 29 Pages 19-20
    Published: 2013
    Released on J-STAGE: May 16, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    Single crystals of complex of Ni(II), bis(O-propyldithiocarbonato-κ2S,S′)(3,5-lutidine-κN)nickel(II) [Ni(S2COCH2CH2CH3)2-(C7H9N)2] have been synthesized by the reaction of bis(O-propyldithiocarbonato)nickel(II) with 3,5-lutidine in acetone, and its structure elucidated by the single-crystal X-ray diffraction method. The complex crystallizes in the triclinic space group P1 with unit-cell parameters: a = 7.008(5), b = 9.546(5), c = 10.621(5)Å, α = 87.484(5)°, β = 72.927(5)° and γ = 75.686(5)°. The crystal structure was solved by direct methods and refined by full-matrix least-squares procedures to a final R-value of 0.0371 for 2074 observed reflections. The two pyridine rings are coplanar, and are held almost perpendicular to the dithiocarbonato groups. The compound has a trans octahedral geometry.
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  • Masahiro MIKURIYA, Kazuya OUCHI, Yasutaka NAKANISHI, Daisuke YOSHIOKA, ...
    2013 Volume 29 Pages 21-22
    Published: 2013
    Released on J-STAGE: May 16, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, an adduct of rhodium(II) benzoate [Rh2(bz)4] with piperazine (pip), catena(tetrakis(μ-benzoato-O,O′)(μ-piperazine-N,N′)dirhodium(II)-acetonitrile (1/2)) [Rh2(bz)4(pip)]n·2nCH3CN, was isolated, and the crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the triclinic space group P1 with a = 10.812(2)Å, b = 11.393(3)Å, c = 15.331(3)Å, α = 71.014(5)°, β = 87.063(5)°, γ = 76.451(5)°, V = 1734.4(8)Å3, Dx = 1.644 g/cm3, and Z = 2. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0558 and 0.1367, respectively, for all 6986 independent reflections. The crystal contains zigzag chain molecules with an alternating arrangement of Rh2(bz)4 [Rh-Rh 2.4010(10), 2.4066(10)Å] and piperadine, and acetonitrile molecules. The adsorption property was confirmed for N2 with a specific surface area of 52.7 m2/g.
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Part 6
  • Ryota IGARASHI, Hiromasa NAGASE, Takayuki FURUISHI, Tomohiro ENDO, Kaz ...
    2013 Volume 29 Pages 23-24
    Published: 2013
    Released on J-STAGE: June 19, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The crystal structure of epalrestat non-solvate (C15H13NO3S2) was determined by X-ray crystallography. The compound crystallized in a triclinic system and was characterized as follows: P1, a = 8.20888(15)Å, b = 11.6639(2)Å, c = 16.3107(3)Å, α = 96.5985(8)°, β = 93.8393(8)°, γ = 104.6780(8)°, Z = 4, V = 1493.22(5)Å3. Neighboring epalrestat molecules formed intermolecular hydrogen bonds between the carboxyl group and the carbonyl group of the rhodanine ring and the cyclic structure from four molecules.
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  • Makoto HANDA, Takahisa IKEUE, Yasuko HARADA, Yuko KIMURA, Takuya NISHI ...
    2013 Volume 29 Pages 25-26
    Published: 2013
    Released on J-STAGE: June 19, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound of N,N′-bis(3,5-dichlorophenyl)formamidine, which is abbreviated as H(3,5-Cl2-pf), was isolated, and the crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the triclinic space group P1 with a = 7.9265(13)Å, b = 9.3588(15)Å, c = 10.4003(17)Å, α = 76.579(3)°, β = 72.529(2)°, γ = 74.249(2)°, V = 698.7(2)Å3, Dx = 1.588 g/cm3, and Z = 2. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0276 and 0.0771, respectively, for all 3046 independent reflections. The C-N (amine) single bond (1.3486(18)Å) and C=N (imine) double bond (1.2836(18)Å) within the H(3,5-Cl2-pf) molecule were confirmed. Two H(3,5-Cl2-pf) molecules are associated with a set of hydrogen bonds through each amine and imine nitrogen atoms with a Namine...Nimine distance of 3.0264(17)Å.
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Part 7
  • Takashi YOKOYAMA, Takuya SHIBA, Masakazu YOSHISE, Masanori TODA, Haruo ...
    2013 Volume 29 Pages 27-28
    Published: 2013
    Released on J-STAGE: July 19, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The crystal structure of a copper(II) complex with 2-pyridinecarboxylic acid anhydride ([Cu2(2-Py)2(H2O)(OH)2(SO4)]) was determined by single-crystal X-ray diffractometry. [Cu2(2-Py)2(H2O)(OH)2(SO4)] crystallized in the orthorhombic system, space group Cmc21, with a = 16.046(2), b = 12.8608(8), c = 12.8905(9)Å, V = 2660.2(4)Å3, Z = 4. The crystal structure was solved by direct methods and refined by full-matrix least squares on F2 to final values of R1 = 0.0613. The complex would produce a π-π interaction between [Cu(2-Py)(OH)2] and [Cu(2-Py)(H2O)(SO4)] in cooperation with a weak coordination of the sulfate ion to the copper(II).
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  • Masahiro MIKURIYA, Junya YAMAMOTO, Kazuya OUCHI, Shohei TAKADA, Daisuk ...
    2013 Volume 29 Pages 29-30
    Published: 2013
    Released on J-STAGE: July 19, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, a chain adduct of rhodium(II) acetate with 1,2-bis(4-pyridyl)ethane (bpe), catena(tetrakis(μ-acetao-O,O′)(μ-1,2-bis(4-pyridyl)ethane-N,N′)dirhodium(II)-water (1/2)), [Rh2(CH3CO2)4(bpe)]n·2nH2O, was isolated. The crystal structure was determined by the single-crystal X-ray diffraction method at 293 K. It crystallizes in the monoclinic space group C2/c with a = 24.937(5)Å, b = 13.211(3)Å, c = 8.8480(19)Å, β = 94.189(3)°, V = 2907.0(11)Å3, Dx = 1.513 g/cm3, and Z = 4. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0356 and 0.0863, respectively, for all 3324 independent reflections. The molecule has a linear chain with an alternating arrangement of Rh2(CH3CO2)4 [Rh-Rh 2.3990(8)Å] and bpe. The specific surface area estimated from a N2 adsorption isotherm was 65.6 m2 g-1.
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Part 8
  • Masahiro MIKURIYA, Noriaki KAIHARA, Junya YAMAMOTO, Shohei TAKADA, Dai ...
    2013 Volume 29 Pages 31-32
    Published: 2013
    Released on J-STAGE: August 24, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, a chain adduct of molybdenum(II) acetate with 1,2-bis(4-pyridyl)ethane (bpe), catena(tetrakis(μ-acetato-O,O′)(μ-1,2-bis(4-pyridyl)ethane-N,N′)dimolybdenum(II)), [Mo2(CH3CO2)4(bpe)]n, was synthesized, and the crystal structure was determined by the single-crystal X-ray diffraction method at 293 K. It crystallizes in the triclinic space group P1 with a = 7.8313(12)Å, b = 8.5393(13)Å, c = 9.9498(14)Å, α = 73.412(3)°, β = 68.894(2)°, γ = 73.198(3)°, V = 581.86(15)Å3, Dx = 1.747 g/cm3, and Z = 1. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0309 and 0.0680, respectively, for all 2580 independent reflections. The molecule has a zigzag chain structure with an alternating arrangement of Mo2(CH3CO2)4 [Mo-Mo 2.0984(5)Å] and bpe. The adsorption isotherm was investigated, and no adsorption property was found for N2.
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  • Masahiro MIKURIYA, Shohei TAKADA, Daisuke YOSHIOKA, Hidekazu TANAKA, M ...
    2013 Volume 29 Pages 33-34
    Published: 2013
    Released on J-STAGE: August 24, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, a chain adduct of molybdenum(II) acetate with trans-1,2-bis(4-pyridyl)ethylene (bpel), catena(tetrakis(μ-acetato-O,O′)(μ-trans-1,2-bis(4-pyridyl)ethylene-N,N′)dimolybdenum(II)), [Mo2(CH3CO2)4(bpel)]n, was synthesized, and the crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the triclinic space group P1 with a = 7.6144(15)Å, b = 8.4800(16)Å, c = 9.7140(19)Å, α = 99.026(3)°, β = 112.749(3)°, γ = 103.210(3)°, V = 541.72(18)Å3, Dx = 1.871 g/cm3, and Z = 1. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0336 and 0.0898, respectively, for all 2324 independent reflections. The molecule has a zigzag chain structure with an alternating arrangement of Mo2(CH3CO2)4 and bpel [Mo-Mo 2.1038(5)Å, Mo-N 2.591(3)Å]. The adsorption isotherm was investigated and no adsorption property was found for N2.
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Part 9
Part 10
Part 11
  • Takashi FUJIMOTO, Daisuke MIURA, Akari IWAMOTO, Tomoya MACHINAMI, Mits ...
    2013 Volume 29 Pages 43-44
    Published: 2013
    Released on J-STAGE: November 18, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    A crystal of β-D-fructofuranosyl 4-chloro-4-deoxy-α-D-galactopyranoside was prepared, and its crystal structure was determined at the space group P21. The cell parameters were a = 8.048(5), b = 8.682(5), c = 12.059(8)Å, β = 107.03(2)° and Z = 2. The crystal structure was solved by a direct method and refined by full-matrix least-squares to a final R value of 0.0529.
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  • Masahiro MIKURIYA, Junya YAMAMOTO, Kazuya OUCHI, Daisuke YOSHIOKA, Hid ...
    2013 Volume 29 Pages 45-46
    Published: 2013
    Released on J-STAGE: November 18, 2013
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, a chain adduct of rhodium(II) benzoate with 1,4-diazabicyclo[2.2.2]octane (dabco), catena(tetrakis(μ-benzoato-O,O′)(μ-1,4-diazabicyclo[2.2.2]octane-N,N′)dirhodium(II)-acetonitrile(1/4)), [Rh2(C6H5CO2)4(dabco)]n·4nCH3CN, was isolated. The crystal structure was determined by the single-crystal X-ray diffraction method at 293 K. It crystallizes in the tetragonal space group P4/n with a = 21.3695(18)Å, c = 9.6278(12)Å, V = 4396.6(8)Å3, Dx = 1.468 g/cm3, and Z = 4. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0417 and 0.0825, respectively, for all 5185 independent reflections. The molecule has a linear chain with an alternating arrangement of Rh2(C6H5CO2)4 [Rh-Rh 2.4062(11)Å, 2.4110(11)Å] and dabco. The adsorption property was confirmed for N2 gas with a specific surface area of 387.8 m2 g-1 estimated from an N2 adsorption isotherm.
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Part 12
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