X-ray Structure Analysis Online
Online ISSN : 1883-3578
ISSN-L : 1883-3578
Volume 30
Displaying 1-30 of 30 articles from this issue
Part 1
  • R. KEFI, M. ZELLER, C. Ben NASR
    2014 Volume 30 Pages 1-2
    Published: 2014
    Released on J-STAGE: January 22, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The synthesis and crystal structure of a new bis[3-(ammoniomethyl)pyridinium]hexachloridocadmate dihydrate are discussed based on X-ray crystallographic structure analysis. This compound crystallizes in the triclinic system, with the space group P1 and the following parameters: a = 7.7067(12), b = 7.7840(11), c = 9.6014(16)Å, α = 81.517(5), β = 82.723(5), γ = 66.728(6)°, Z = 1 and V = 521.84(14)Å3. The crystal structure was determined and refined to R = 0.017 using 3243 independent reflections. The assymmetric part of the unit cell contains a [3-(ammoniomethyl)pyridinium] dication, one half of a hexachloridocadmate anion and a water molecule. The compound is built up from inorganic layers formed by CdCl64- anions and ammonium groups. The organic entities and the water molecules are located between these layers, and are connected to them via C-H…Cl, N-H…O and O-H…Cl hydrogen bonds.
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  • Daisuke MIURA, Takashi FUJIMOTO, Mitsuru TASHIRO, Tomoya MACHINAMI
    2014 Volume 30 Pages 3-4
    Published: 2014
    Released on J-STAGE: January 22, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The crystal structure of 1,3,4,5-tetra-O-acetlyl-α-D-tagatopyranose was determined at the space group P212121 with cell parameters a = 7.939(12), b = 13.469(3), and c = 15.825(3)Å. The compound crystalizes in an orthorhombic system with V = 1692.2(5)Å3 and Z = 4.
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Part 2
  • Ratika SHARMA, Sumati ANTHAL, V. PRAKASH, J. SARAVANAN, Vivek K. GUPTA ...
    2014 Volume 30 Pages 5-6
    Published: 2014
    Released on J-STAGE: February 21, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, 2-amino-4,5,6,7-tetrahydrobenzo[b]thiophene-3-carbonitrile, C9H10N2S, crystallizes in the monoclinic space group P21/c with unit-cell parameters: a = 13.3994(11), b = 17.0170(16), c = 7.9319(8)Å, β = 90.051(9)°, Z = 8. The asymmetric unit of the title compound, C9H10N2S, contains two crystalographiclly independent molecules, A and B; the cyclohexene rings in both molecules exhibits the half-chair conformation. The packing of the molecules is stabilized by a few N-H…N interactions, which are arranged in such a manner as to form chains.
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  • Naoyuki MASUDA, Yoshihisa KAKUTA, Daisuke YOSHIOKA, Masahiro MIKURIYA
    2014 Volume 30 Pages 7-8
    Published: 2014
    Released on J-STAGE: February 21, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, N-salicylidene-2-hydroxy-5-bromobenzylamine, was synthesized and the crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the monoclinic space group P21/c with a = 11.3923(17)Å, b = 12.7998(19)Å, c = 8.6342(13)Å, β = 97.097(3)°, V = 1249.4(3)Å3, Dx = 1.628 g/cm3, and Z = 4. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0284 and 0.0693, respectively, for all 2852 independent reflections. The molecule is bent with a dihedral angle between the two aromatic rings of 66.05(6)°.
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Part 3
  • Hideaki ISHIDA, Makoto HANDA, Masahiro MIKURIYA
    2014 Volume 30 Pages 9-10
    Published: 2014
    Released on J-STAGE: March 21, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The deuterated title compound, aqua adduct of ruthenium 3,4,5-tri(ethoxy-d5)benzoate, diaquatetrakis(μ-3,4,5-tri(ethoxy-d5)benzoato-O,O′)diruthenium(1+) tetrafluoroborate-tetrahydrofuran (1/1), [Ru2{3,4,5-(C2D5O)3CH2CO2}4(H2O)2]BF4·C4H8O, was synthesized. The crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the monoclinic space group C2/c with a = 27.243(4)Å, b = 10.4850(15)Å, c = 23.115(3)Å, β = 100.789(3)°, V = 6486.1(16)Å3, Dx = 1.506 g/cm3, and Z = 4. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0460 and 0.1037, respectively, for all 6597 independent reflections. The complex cation has a lantern-like dinuclear ruthenium core with axial water molecules [Ru-Ru 2.2629(8)Å].
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  • Kazuhiro MORIWAKI, Ryouichi YOSHIDA, Haruo AKASHI
    2014 Volume 30 Pages 11-12
    Published: 2014
    Released on J-STAGE: March 21, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, [{Mo3S4(Tpms)2}2(μ-O)(μ-Cl)2]·5CH2Cl2 (Tpms = tris(pyrazolyl)methanesulfonate), crystallized in the monoclinic space group C2/c with the following unit-cell parameters: a = 24.509(7)Å, b = 29.273(6)Å, c = 16.490(5)Å, β = 132.942(3)°, V = 8661(4)Å3 and Z = 4. The crystal structure was solved by direct methods, and refined by full-matrix least-squares procedures to a final R-value of 0.0798 for 7989 observed reflections. A Tpms ligand coordinated to the molybdenum atom through the two nitrogen atoms in two pyrazole rings and one oxygen atom in a sulfonato group. Another Tpms ligand coordinated to the molybdenum atom through three nitrogen atoms in three pyrazolyl rings. The remaining molybdenum atom was bridged to an adjacent molybdenum atom in another Mo3S4 core by two chloride anions and one oxygen atom.
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Part 4
Part 5
Part 6
  • Masahiro MIKURIYA, Norihito TSUKIMI, Takashi ONO, Yusuke TANAKA, Daisu ...
    2014 Volume 30 Pages 25-26
    Published: 2014
    Released on J-STAGE: June 18, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, a chain adduct of molybdenum(II) benzoate with 4,4′-bipyridyl (4,4′-bpy), catena(tetrakis(μ-benzoato-O,O′)(μ-4,4′bipyridyl-N,N′)dimolybdenum(II)-tetrahydrofuran (1/0.5)), [Mo2(C6H5CO2)4(4,4′-bpy)]n·0.5nTHF, was synthesized; the crystal structure was determined by the single-crystal X-ray diffraction method at 293 K. It crystallizes in the triclinic space group P1 with a = 9.9230(18)Å, b = 11.047(2)Å, c = 17.532(3)Å, α = 91.037(4)°, β = 100.373(3)°, γ = 107.515(3)°, V = 1796.7(6)Å3, Dx = 1.605 g/cm3, Dm(floatation) = 1.629 g/cm3, and Z = 2. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0383 and 0.1088, respectively, for all 7875 independent reflections. The molecule has a zigzag chain structure with an alternating arrangement of Mo2(C6H5CO2)4 and 4,4′-bpy [Mo-Mo 2.1113(6), 2.1151(6)Å, Mo-N 2.633(3), 2.647(3)Å]. The adsorption isotherm showed a limited adsorbing property with the type II in the IUPAC classification for N2. The specific surface area, SBET, was 2.71 m2 g-1.
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  • Yongjing HAO, Juan XIE, Xiaocai MENG, Xiaorui GAO
    2014 Volume 30 Pages 27-28
    Published: 2014
    Released on J-STAGE: June 18, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, C19H14N4O, was synthesized and characterized by X-ray diffraction analysis. This compound crystallizes in the orthorhombic space group Pbcn with the following uinte-cell parameters: a = 7.9513(8)Å, b = 23.364(2)Å, c = 8.3103(8)Å and V = 1543.9(3)Å3. The crystal structure was solved with a final R of 0.0439 using 1902 independent reflections; it contains half of one independent molecule in an asymmetric unit. It is worth noting that one title molecule contains four hydrogen-bond interactions.
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  • Yoshihiro ISHIMARU, Naoyuku SHIMOYAMA, Takashi FUJIHARA
    2014 Volume 30 Pages 29-30
    Published: 2014
    Released on J-STAGE: June 18, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The [24]dithahexaphyrin(1.0.0.1.0.0) dimer (bis[24]dithahexaphyrin(1.0.0.1.0.0)), molecular formula C100H94N8S4, was isolated. The crystal structure of the compound was determined by single-crystal X-ray diffraction at 200(2)K, and was assigned to the monoclinic space group P21/c with a = 14.8374(15)Å, b = 25.661(3)Å, c = 24.038(2)Å, β = 93.736(1)°, V = 9133.1(16)Å3, Dx = 1.117 g/cm3, and Z = 4. From 18,645 independent reflections, R1 [I > 2σ(I)] was determined to be 0.0734, and wR2 was found to be 0.1683. This value was calculated for all of the reflection data. The dimer contains an antiaromatic molecule.
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  • Makoto HANDA, Takahisa IKEUE, Masanari IIDA, Daisuke YOSHIOKA, Masahir ...
    2014 Volume 30 Pages 31-32
    Published: 2014
    Released on J-STAGE: June 18, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound of a lantern-type diruthenium(II,III) complex, [Ru2(2,6-Me2-pf)(O2CMe)3Cl(THF)2]·0.5THF·H2O (2,6-Me2-pf = N,N′-bis(2,6-dimethylphenyl) formamidinate ion), was isolated, and the crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the monoclinic space group C2/c with a = 26.178(5)Å, b = 13.567(3)Å, c = 18.796(4)Å, β = 108.168(4)°, V = 6343(2)Å3, Dx = 1.659 g/cm3, and Z = 8. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0294 and 0.0591, respectively, for all 7283 independent reflections. The Ru-Ru distance is 2.2931(5)Å and the axial Ru-Cl and Ru-O (THF) distances are 2.4923(9) and 2.315(2)Å, respectively. The 1H NMR spectrum was measured in CD2Cl2 at 298 K, and the observed signals were assigned for the 2,6-Me2-pf- and MeCO2- ligands.
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Part 7
  • Yoshihiro ISHIMARU, Haruaki SHIBA, Takashi FUJIHARA
    2014 Volume 30 Pages 33-34
    Published: 2014
    Released on J-STAGE: July 19, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    Bis[pentafluorophenyl[24]dithahexaphyrin(1.0.0.1.0.0)] 1, molecular formula C100H74F20N8S4, was isolated in this study. The crystal structure of the title compound was determined by single-crystal X-ray diffraction at 150(2)K, and was assigned to the monoclinic space group P21/c with a = 17.755(4)Å, b = 21.580(4)Å, c = 25.600(5)Å, β = 102.312(3)°, V = 9583(3)Å3, Dx = 1.314 g/cm3, and Z = 4. From 16887 independent reflections, R1 [I > 2σ(I)] and wR2 were determined to be 0.0716 and 01467, respectively. These values were calculated for all reflection data.
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  • Akihiro YOKOYAMA, Natsumi KAWANO, Yuka WADA, Michihiro NISHIKAWA, Kazu ...
    2014 Volume 30 Pages 35-36
    Published: 2014
    Released on J-STAGE: July 19, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The crystal structure of N-isopropylanthranilic acid trimer was characterized by a single-crystal X-ray diffraction method to study the conformation of oligo(o-benzamide). The compound crystallized in a triclinic space group, P1, with a = 7.720(4)Å, b = 9.006(4)Å, c = 20.131(9)Å, α = 92.459(7)°, β = 95.299(7)°, γ = 91.099(7)°, V = 1391.9(11)Å3, and Z = 2. In the crystal structure, one of the amide linkages adopts a cis conformation, while the other adopts a trans conformation.
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  • Takahisa IKEUE, Nami MURAI, Yuya HIRAOKA, Takeshi KUBOTA, Kohji OMATA, ...
    2014 Volume 30 Pages 37-38
    Published: 2014
    Released on J-STAGE: July 19, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound of a (2,3,12,13-tetrabromo-5,10,15,20-tetraphenylporphyrinato)oxidovanadium(IV) complex, VO(TPPBr4),·4CHCl3, was isolated and the crystal structure was determined by the single-crystal X-ray diffraction method at 90 K. It crystallizes in the monoclinic space group P21/m with a = 9.3075(12)Å, b = 20.839(3)Å, c = 13.7601(17)Å, β = 90.797(2)°, V = 2668.7(6)Å3, Dx = 1.833 g/cm3, and Z = 2. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0475 and 0.1419, respectively, for all 6298 independent reflections. The V-Naverage distance is 2.055(5)Å and the axial V=O distance is 1.604(4)Å. The porphyrin ring distorted to a saddle-shaped structure. Large red-shifts of the Soret and Q bands (observed at 462 nm and 562, 604 nm, respectively, in CH2Cl2) are considered to be due to distortion of the porphyrin ring.
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Part 8
  • Masahiro MIKURIYA, Noriaki KAIHARA, Takashi ONO, Yusuke TANAKA, Daisuk ...
    2014 Volume 30 Pages 39-40
    Published: 2014
    Released on J-STAGE: August 20, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, a chain adduct of molybdenum(II) benzoate with 1,2-bis(4-pyridyl)ethane (bpe), catena(tetrakis(μ-benzoato-O,O′)(μ-1,2-bis(4-pyridyl)ethane-N,N′)dimolybdenum(II)), [Mo2(C6H5CO2)4(bpe)]n, was synthesized; the crystal structure was determined by the single-crystal X-ray diffraction method at 293 K. It crystallizes in the triclinic space group P1 with a = 8.2457(17)Å, b = 10.506(2)Å, c = 12.142(3)Å, α = 114.583(4)°, β = 90.398(4)°, γ = 108.768(4)°, V = 893.4(3)Å3, Dx = 1.599 g/cm3, Dm = 1.60 g/cm3, and Z = 1. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0362 and 0.0716, respectively, for all 3971 independent reflections. The molecule has a chain structure with an alternating arrangement of Mo2(C6H5CO2)4 and bpe [Mo-Mo 2.1095(5)Å, Mo-N 2.608(2)Å]. The N2 adsorption isotherm was investigated and a Type II adsorption property with a SBET value of 2.47 m2 g-1 was found.
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  • Masahiro MIKURIYA, Noriaki KAIHARA, Takashi ONO, Yusuke TANAKA, Daisuk ...
    2014 Volume 30 Pages 41-42
    Published: 2014
    Released on J-STAGE: August 20, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    A chain complex of molybdenum(II) benzoate with 1,2-bis(4-pyridyl)ethylene (bpel), catena(tetrakis(μ-benzoato-O,O′) (μ-1,2-bis(4-pyridyl)ethylene-N,N′)dimolybdenum(II)), [Mo2(C6H5CO2)4(bpel)]n, was synthesized; the crystal structure was determined by the single-crystal X-ray diffraction method at 293 K. It crystallizes in the triclinic space group P1 with a = 8.2328(10)Å, b = 10.5428(13)Å, c = 12.0915(6), α = 114.438(2)°, β = 90.934(2)°, γ = 108.726(2)°, V = 891.26(19)Å3, Dx = 1.600 g/cm3, and Z = 1. The R1 [I > 2σ(I)] and wR2 (all data) values are 0.0415 and 0.0864, respectively, for all 3904 independent reflections. The molecule has a chain structure with an alternating arrangement of Mo2(C6H5CO2)4 and bpel [Mo-Mo 2.1098(5)Å, Mo-N 2.610(3)Å]. The N2 adsorption isotherm was investigated, and a Type II adsorption property with a SBET value of 2.1 m2 g-1 was found.
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Part 9
Part 10
  • Hiroki AKUTSU, Jun-ichi YAMADA, Shin'ichi NAKATSUJI, Scott S. TURNER
    2014 Volume 30 Pages 49-50
    Published: 2014
    Released on J-STAGE: October 21, 2014
    JOURNAL FREE ACCESS
    Supplementary material
    The title compound, (C24H20P)(FeN2O2Cl2), was prepared by adapting of literature methods. It crystallizes in the tetragonal space group P4. The structure consists of one P(C6H5)4 cation and one Fe(NO)2Cl2 anion. The anion has one ordered NO group and one ordered Cl ligand. The other two ligands are disordered, such that one half of NO and a half of Cl are located at each position.
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Part 11
Part 12
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