We studied whether or not a bacterial community structure in an epilithon on riverbed stones changes with the size of the sampling area. The aveage number of colony forming units (CFU) did not differ greatly using different sizes of sampling areas, but the number of CFU obtained from a 0.1 × 0.1 cm
2 sampling size varied significantly. Bacterial community structure obtained from a 2 × 2 cm
2 sampling size and a 0.1 × 0.1 cm
2 sampling size were compared based on the types distinguished by Gram staining, cell form and colony pigments. As a result, when a 0.1 × 0.1 cm
2 sampling size was used, more types were detected than in a 2 × 2 cm
2 sampling size.
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