Deoxyribonucleic acids (DNAs) in dried fruit products were examined for detectability using real-time polymerase chain reaction
(PCR). Endogenous genes with low copy numbers in
Carica papaya L. (papaya),
Solanum lycopersicum L. (tomato) and
Malus
domestica (apple) genomic DNAs, i.e.,
Chymopapain, LAT52 and
Apo 5, respectively, were targeted for detection in dried fruit
products that were processed with and without food additive sulfites as a bleaching agent, preservative or antioxidant. A total of
13/14 dried papaya, 8/8 dried tomato and 3/3 dried apple products that were processed with sulfites were not detected under a Cq
value of 40 in a duplicate real-time PCR test. Despite their undetectability, endogenous 18S rDNA with high copy numbers in the
genomic DNA of these fruits was detected at approximately the same amplicon size as the endogenous genes with low copy numbers.
Furthermore,
BAN, a single-copy endogenous gene found in all dried
Musa acuminata (banana) products, was detected using a 50 ng
DNA template at a Cq value of 22.33–35.80 regardless of whether the fruit was processed with or without sulfites. Although the dried
fruit products that were processed with sulfites may contain DNAs, the yields of extracted and purified DNAs were reduced to the
degree that not all endogenous genes could be detected reliably using real-time PCR. This may affect the reliability of real-time PCR
testing for detecting specific ingredients in dried fruit products, such as genetically modified fruit and food allergens.
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