Seibutsu Butsuri

Volume 49, Issue supplement

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1TA5-05 Molecular trapped time in metastable raft domains in steady-state cells is much shorter than 1 ms(The 47th Annual Meeting of the Biophysical Society of Japan)

Kenichi G. N. Suzuki, Takahiro K. Fujiwara, Akihiro Kusumi

Article type: Article
2009Volume 49Issue supplement Pages S31-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S31_5

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1TA5-06 A role of [Ca2+]i in motile sperms in microfluidic environments(The 47th Annual Meeting of the Biophysical Society of Japan)

Koji Matsuura, Yuka Kuroda, Toru Hyakutake, Shinichiro Yanase, Keiji N ...

Article type: Article
2009Volume 49Issue supplement Pages S31-S32
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S31_6

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1TA5-07 Cellular Shape, motion and forces on various adhesive surfaces(The 47th Annual Meeting of the Biophysical Society of Japan)

Hirokazu Tanimoto, Miki Matsuo, Masaki Sano

Article type: Article
2009Volume 49Issue supplement Pages S32-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S32_1

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1TA5-08 quantification and 3D simulation reconstruction of the cytoplasmic streaming in C. elegans embryo to elucidate its mechanical basis(The 47th Annual Meeting of the Biophysical Society of Japan)

Ritsuya Niwayama, Kyousuke Shinohara, Akatsuki Kimura

Article type: Article
2009Volume 49Issue supplement Pages S32-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S32_2

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1TA5-09 A new theory of stochastic simulation and its application to F-actin dynamics(The 47th Annual Meeting of the Biophysical Society of Japan)

Kazuhisa Ichikawa, Koji Yamada, Kensuke Tsuda

Article type: Article
2009Volume 49Issue supplement Pages S32-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S32_3

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1TP2-01 Analysis of local protein conformations in photoreceptor ppR and its mutant T204A by solid-state NMR(The 47th Annual Meeting of the Biophysical Society of Japan)

Tetsurou Hidaka, Izuru Kawamura, Takudo Nishio, Kazuhiro Osawa, Naoki ...

Article type: Article
2009Volume 49Issue supplement Pages S32-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S32_4

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1TP2-02 Molecular dynamical analysis of a HAMP domain : A four-helix bundle structure satisfies the data of electron paramagnetic resonance(The 47th Annual Meeting of the Biophysical Society of Japan)

Koro Nishikata, Sotaro Fuchigami, Mitsunori Ikeguchi, Akinori Kidera

Article type: Article
2009Volume 49Issue supplement Pages S32-S33
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S32_5

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1TP2-03 Comparative studies on the pH-dependency of the active intermediate between rod and cone visual pigments.(The 47th Annual Meeting of the Biophysical Society of Japan)

Keita Sato, Takahiro Yamashita, Yoshinori Shichida

Article type: Article
2009Volume 49Issue supplement Pages S33-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S33_1

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1TP2-04 Photoisomerization efficiency of the retinal chromophore in rhodopsin mutants with displaced counterion(The 47th Annual Meeting of the Biophysical Society of Japan)

Kei Tsutsui, Yoshinori Shichida

Article type: Article
2009Volume 49Issue supplement Pages S33-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S33_2

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1TP2-05 Comparative analyses of ligand-induced dimeric rearrangements of metabotropic glutamate receptors(The 47th Annual Meeting of the Biophysical Society of Japan)

Masataka Yanagawa, Takahiro Yamashita, Yoshinori Shichida

Article type: Article
2009Volume 49Issue supplement Pages S33-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S33_3

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1TP2-06 Exploring Molecular Functions of Parietopsin(The 47th Annual Meeting of the Biophysical Society of Japan)

Kazumi Sakai, Yasushi Imamoto, Takahiro Yamashita, King-Wai Yau, Chih- ...

Article type: Article
2009Volume 49Issue supplement Pages S33-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S33_4

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1TP2-07 The mutation study to create proton pumps from a bacterial sensor rhodopsin(The 47th Annual Meeting of the Biophysical Society of Japan)

Akira Kawanabe, Kwang-Hwan Jung, Hideki Kandori

Article type: Article
2009Volume 49Issue supplement Pages S33-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S33_5

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1TP2-08 Encapsulation of ion-pumping rhodopsins into multi-wall carbon nanotubes(The 47th Annual Meeting of the Biophysical Society of Japan)

Takayoshi Kawashima, Kazuhiro Yanagi, Zheng Liu, Yuji Furutani, Kazuto ...

Article type: Article
2009Volume 49Issue supplement Pages S33-S34
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S33_6

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1TP2-09 Low-temperature FTIR study of primate color pigments(The 47th Annual Meeting of the Biophysical Society of Japan)

Kota Katayama, Yuji Furutani, Hiroo Imai, Hideki Kandori

Article type: Article
2009Volume 49Issue supplement Pages S34-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S34_1

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1TP3-01 A channeling role of the non-native intermediate in the folding of β-lactoglobulin(The 47th Annual Meeting of the Biophysical Society of Japan)

Shunsuke Fujioka, Kazumasa Sakurai, Tsuyoshi Konuma, Masanori Yagi, Yu ...

Article type: Article
2009Volume 49Issue supplement Pages S34-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S34_2

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1TP3-02 Folding, unfolding and misfolding behaviours of immunoglobulin light chain variable domain(The 47th Annual Meeting of the Biophysical Society of Japan)

Daizo Hamada

Article type: Article
2009Volume 49Issue supplement Pages S34-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S34_3

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1TP3-03 Cyanobacterial DnaK/DnaJ/GrpE system and the modulation of its refolding activity by HtpG(The 47th Annual Meeting of the Biophysical Society of Japan)

Kensaku Fujita, Hitoshi Nakamoto

Article type: Article
2009Volume 49Issue supplement Pages S34-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S34_4

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1TP3-04 Cell toxicity and inner structure analysis of novel insulin filaments using novel luminescent conjugate polymers(The 47th Annual Meeting of the Biophysical Society of Japan)

Takahiro Kobayashi, Tamotsu Zako, Masafumi Sakono, Mikael Lindgren, Pe ...

Article type: Article
2009Volume 49Issue supplement Pages S34-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S34_5

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1TP3-05 Characterization of monomeric polyglutamine peptides by replica exchange molecular dynamics simulation(The 47th Annual Meeting of the Biophysical Society of Japan)

Miki Nakano, Hirofumi Watanabe, Shigenori Tanaka

Article type: Article
2009Volume 49Issue supplement Pages S34-S35
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S34_6

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1TP3-06 Effects of Pressure on Volume-Fluctuation Dynamics of Proteins(The 47th Annual Meeting of the Biophysical Society of Japan)

Kunitsugu Soda, Yudai Shimpo, Yasutaka Seki, Makoto Taiji

Article type: Article
2009Volume 49Issue supplement Pages S35-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S35_1

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1TP3-07 Peptide conformational preferences in different solutions analyzed by transfer free energy calculations(The 47th Annual Meeting of the Biophysical Society of Japan)

Hironori Kokubo, Char Hu, B. Montgomery Pettitt

Article type: Article
2009Volume 49Issue supplement Pages S35-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S35_2

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1TP3-08 Amyloidogenic fibrils and the structure of human calcitonin in the presence of phospholipidbilayers as studied by 13C solid-state NMR(The 47th Annual Meeting of the Biophysical Society of Japan)

Yuki Abe, Miya Kamihira, Hikari Watanabe, Atsushi Kira, Izumi Yamane, ...

Article type: Article
2009Volume 49Issue supplement Pages S35-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S35_3

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1TP4-01 Micro-objects driven by Chlamydomonas(The 47th Annual Meeting of the Biophysical Society of Japan)

Taishi Tonooka, Kaori Kuribayashi, Hiroaki Onoe

Article type: Article
2009Volume 49Issue supplement Pages S35-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S35_4

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1TP4-02 Cell cycle-dependent microtubule-based dynamic transport of cytoplasmic dynein in mammalian cells(The 47th Annual Meeting of the Biophysical Society of Japan)

Takuya Kobayashi, Yoshitaka Kimori, Nobuhiro Morone, Takashi Murayama

Article type: Article
2009Volume 49Issue supplement Pages S35-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S35_5

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1TP4-03 Motility of single molecules of kinesin and cytoplasmic dynein in the presence of many molecules of motor proteins on microtubules(The 47th Annual Meeting of the Biophysical Society of Japan)

Keitaro Shibata, Ken'ya Furuta, Masaki Edamatsu, Yoko Toyoshima

Article type: Article
2009Volume 49Issue supplement Pages S35-S36
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S35_6

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1TP4-04 Model analysis of cooperative behavior in multiple myosin system(The 47th Annual Meeting of the Biophysical Society of Japan)

Takeshi Nakagawa, Hiroto Tanaka, Kazuo Sasaki

Article type: Article
2009Volume 49Issue supplement Pages S36-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S36_1

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1TP4-05 Role of the neck linker in controlling the ATP hydrolysis reaction of kinesin(The 47th Annual Meeting of the Biophysical Society of Japan)

Xiao Ling, Teppei Mori, Michiko Nakajima, Michio Tomishige

Article type: Article
2009Volume 49Issue supplement Pages S36-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S36_2

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1TP4-06 Crystal Structure of Nucleotide-free Kinesin-1 Motor Domain Explains Coordinated Walking Mechanism(The 47th Annual Meeting of the Biophysical Society of Japan)

Tsukasa Makino, Teppei Mori, Ken-ichi Miyazono, Masaru Tanokura, Michi ...

Article type: Article
2009Volume 49Issue supplement Pages S36-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S36_3

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1TP4-07 Characterisation of a torque component present in the kinesins-driven microtubule movement(The 47th Annual Meeting of the Biophysical Society of Japan)

Junichiro Yajima

Article type: Article
2009Volume 49Issue supplement Pages S36-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S36_4

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1TP4-08 Class VIII myosin is an extremely highly duty ratio(The 47th Annual Meeting of the Biophysical Society of Japan)

Kohji Ito, Rie Matsumoto, Keiichi Yamamoto

Article type: Article
2009Volume 49Issue supplement Pages S36-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S36_5

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1TP4-09 Dynamics of zipping the kinesin neck linker and an RNA hairpin(The 47th Annual Meeting of the Biophysical Society of Japan)

Yasuhiro Imafuku, Neil Thomas

Article type: Article
2009Volume 49Issue supplement Pages S36-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S36_6

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1TP4-10 Angle Dependency of ATP binding event in V1-ATPase(The 47th Annual Meeting of the Biophysical Society of Japan)

Naciye Esma Uner, Masahiro Nakano, Daichi Okuno, Ken Yokoyama, Hiroyuk ...

Article type: Article
2009Volume 49Issue supplement Pages S37-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S37_1

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1TP5-01 The effect of environment on the conformational transition of DNA studied by molecular dynamics simulations(The 47th Annual Meeting of the Biophysical Society of Japan)

Satoshi Fujii, Hidetoshi Kono, Nobuhiro Go, Akinori Sarai

Article type: Article
2009Volume 49Issue supplement Pages S37-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S37_2

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1TP5-02 The Length and Viscosity Dependence of End-to-end Collision Rates in Single-stranded DNA(The 47th Annual Meeting of the Biophysical Society of Japan)

Takanori Uzawa, Ryan Cheng, Dmitrii Makarov, Kevin Plaxco

Article type: Article
2009Volume 49Issue supplement Pages S37-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S37_3

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1TP5-03 Promotion of pyrimidine motif triplex formation at physiological pH by 2'-O,4'-C-aminomethylene bridged nucleic acid modification(The 47th Annual Meeting of the Biophysical Society of Japan)

Kiyomi Sasaki, Norihiro Sato, Satoshi Obika, Takeshi Imanishi, Hidetak ...

Article type: Article
2009Volume 49Issue supplement Pages S37-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S37_4

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1TP5-04 Interaction between tetraplex structure of mouse telomeric DNA and telomeric DNA binding domains of mouse telomere binding protein Pot1(The 47th Annual Meeting of the Biophysical Society of Japan)

Kaoru Kaneda, Hidetaka Torigoe

Article type: Article
2009Volume 49Issue supplement Pages S37-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S37_5

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1TP5-05 Study of RNA base recognition mechanism by aliphatic surface of RNA-binding protein : Case study of NOVA-RNA complex system(The 47th Annual Meeting of the Biophysical Society of Japan)

Ikuo Kurisaki, Atsushi Matsumoto, Kei Yura, Shigenori Tanaka

Article type: Article
2009Volume 49Issue supplement Pages S37-S38
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S37_6

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1TP5-06 Single-molecule force measurement for 30S-mRNA interaction in translation initiation(The 47th Annual Meeting of the Biophysical Society of Japan)

Tomoaki Masuda, Ryo Iizuka, Takashi Funatsu, Sotaro Uemura

Article type: Article
2009Volume 49Issue supplement Pages S38-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S38_1

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1TP5-07 Coarse-grained simulation of protein-DNA complex : dynamics of nucleosome(The 47th Annual Meeting of the Biophysical Society of Japan)

Hiroo Kenzaki, Shoji Takada

Article type: Article
2009Volume 49Issue supplement Pages S38-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S38_2

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1TP5-08 The free energy profile of a nucleosome core particle through the molecular dynamics simulation(The 47th Annual Meeting of the Biophysical Society of Japan)

Naoko Kanaeda, Hisashi Ishida, Hidetoshi Kono

Article type: Article
2009Volume 49Issue supplement Pages S38-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S38_3

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1TP5-09 DNA-binding function of the score and three amino acid peptide repeat domain in a human unknown protein(The 47th Annual Meeting of the Biophysical Society of Japan)

Yasuhiro Nonaka, Shohei Myoba, Etsuro Okabe, Hideki Muto, Masakatsu Ka ...

Article type: Article
2009Volume 49Issue supplement Pages S38-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S38_4

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1TP5-10 Real-time imaging of DNA twisting during Rad51 polymerization(The 47th Annual Meeting of the Biophysical Society of Japan)

Hideyuki Arata, Aurelie Dupont, Judith Mine-Hattab, Axelle Renodon-Cor ...

Article type: Article
2009Volume 49Issue supplement Pages S38-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S38_5

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2TA1-01 Redox state of human lumbar cerebrospinal fluid examined by the sulfhydryl titer of albumin molecules(The 47th Annual Meeting of the Biophysical Society of Japan)

Seiichi Era, Yukie Matsuyama, Tomoyoshi Terada, Takeshi Minami

Article type: Article
2009Volume 49Issue supplement Pages S38-S39
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S38_6

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2TA1-02 Kinase Inhibition modeling by Proteometrics and docking analysis(The 47th Annual Meeting of the Biophysical Society of Japan)

Michael Fernandez, Akinori Sarai, Ahmad Shandar

Article type: Article
2009Volume 49Issue supplement Pages S39-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S39_1

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2TA1-03 Optimal spacing between ubiquitin modification and unstructured initiation site for efficient proteasome-mediated degradation(The 47th Annual Meeting of the Biophysical Society of Japan)

Tomonao Inobe, Susan Fishbain, Sumit Prakash, Andreas Matouschek

Article type: Article
2009Volume 49Issue supplement Pages S39-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S39_2

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2TA1-04 Conformational fluctuation of di-ubiquitin studied by variable pressure NMR spectroscopy(The 47th Annual Meeting of the Biophysical Society of Japan)

Ryo Kitahara, Takashi Hirano, Maho Yagi, Tsunehiro Mizushima, Kazumi H ...

Article type: Article
2009Volume 49Issue supplement Pages S39-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S39_3

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2TA1-05 Chaperonin assists the folding of denatured polypeptide partly tethered on GroEL(The 47th Annual Meeting of the Biophysical Society of Japan)

Fumihiro Motojima, Masasuke Yoshida

Article type: Article
2009Volume 49Issue supplement Pages S39-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S39_4

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2TA1-06 Positional effects of phosphorylation upon fibrillation of tau derived peptide(The 47th Annual Meeting of the Biophysical Society of Japan)

Takashi Konno, Masafumi Inoue, Kazuki Tainaka, Takashi Morii

Article type: Article
2009Volume 49Issue supplement Pages S39-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S39_5

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2TA1-07 A scenario for folding of proteins in terms of the changes in the polarization of the water induced by denaturants : b-Lactoglobulin in aqueous 2,2,2-trifluoroethanol(The 47th Annual Meeting of the Biophysical Society of Japan)

Kazuko Mizuno, Sachie Nakajima, Yasuhiro Fujituka

Article type: Article
2009Volume 49Issue supplement Pages S39-S40
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S39_6

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2TA1-08 Binding of islet amyloid polypeptide to lipid bilayer and amyloid deposition(The 47th Annual Meeting of the Biophysical Society of Japan)

Kenji Sasahara, Kenichi Morigaki, Daizo Hamada

Article type: Article
2009Volume 49Issue supplement Pages S40-
Published: September 20, 2009
Released on J-STAGE: May 01, 2017

DOIhttps://doi.org/10.2142/biophys.49.S40_1

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