Since 2010, angular brown spots with yellow halos have been observed on leaves of yellow-fleshed kiwifruit (
Actinidia chinensis cv. Hort16A) in Saga Prefecture, Japan. In those orchards, severely affected leaders died without buds sprouting or developing new shoots. When new shoots did develop, they wilted and died. On affected branches and shoots, cracks often formed, exuding bacterial ooze or red-rusty brown droplets. The causal bacterium, demonstrated by inoculation and reisolation to be pathogenic on
A. chinensis, was a gram-negative, aerobic rod with one to two polar flagella, and formed opaque, pale yellowish-colored circular colonies. On the basis of biochemical and physiological characterization, PCR analysis of the 16S-23S rDNA internal transcribed spacer (ITS) region, and a multilocus sequence analysis (MLSA) using the concatenated sequences of seven essential genes (
acnB,
cts,
gapA,
gyrB,
pfk,
pgi and
rpoD), we identified the pathogen as
Pseudomonas syringae pv.
actinidiae. Also, based on the symptoms, the disease in
A. chinensis should be called “bacterial canker of kiwifruit”. In addition, the results of the MLSA, additional PCR tests on pathogenic genes (
argK-tox cluster,
cfl, and various effector genes), and biochemical and physiological characterization clearly showed that this pathogen differed from all four previously known MLSA groups (Psa1–Psa4) in
P. syringae pv.
actinidiae, so we named the pathogen “Psa5” and propose that it be treated as an independent MLSA group. We also analyzed 50 strains of bacterial canker pathogens isolated from green-fleshed kiwifruit (
A. deliciosa) or tara vine (
A. arguta) from 1984 to 2001 in Japan and showed that they belonged to Psa1 (=phaseolotoxin-producer); thus, the bacterial canker in
A. deliciosa and
A. arguta in Japan has been caused by the Psa1 group. This is the first report of strains of a new MLSA group (Psa5) causing bacterial canker in
A. chinensis.
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