In the present study, the following novel pyridoxal enzymes have been demonstrated, purified to homogeneity, and characterized enzymologically and physicochemically: lysine ε-transaminase, taurine transaminase, ε-amino acid transaminase, amino acid racemase with low substrate specificity, arginine racemase and selenocysteine β-lyase from bacteria, and the last also from mammalian tissues. Other known but unpurified pyridoxal enzymes were purified mainly from micro-organisms and characterized: kynurenine transaminase, D-amino acid transaminase, ornithine δ-transaminase, γ-aminobutyrate transaminase, aspartate transaminase, alanine racemase, α-amino-ε-caprolactam racemase, aspartate β-decarboxylase, lysine decarboxylase, ornithine decarboxylase, methionine decarboxylase, meso-α, ε-diaminopimelate decarboxylase, kynureninase, methionine γ-lyase, glucosaminate dehydratase and several others. Selenocysteine β-lyase, a novel enzyme that exclusively decomposes L-selenocysteine into L-alanine and elemental selenium was found in various mammalian tissues and aerobic bacteria. The enzyme was purified to homogeneity from pig liver and its physicochemical and enzymological properties were studied. The enzyme is the first proven enzyme that specifically acts on selenium compounds. meso-Diaminopimelate decarboxylase, a pyridoxal 5'-phosphate enzyme that catalyzes the decarboxylation of the R_D center of meso-diaminopimelic acid to give L-lysine, has been purified to homogeneity from Bacillus sphaericus. The enzyme was found to operate with inversion of configuration, in direct contrast to other PLP-dependent α-decarboxylases for which the stereochemistry of reaction has been determined. In all other cases examined, the reaction proceeds with retention of configuration--that is, the incoming proton occupies the same stereochemical position as did the departing carboxyl group. We have purified and crystallized four bacterial ε-aminotransferases: L-lysine ε-aminotransferase, taurine: α-ketoglutarate aminotransferase, ε-amino acid: pyruvate aminotransferase, and L-ornithine δ-aminotransferase, to characterize them. L-lysine ε-aminotransferase and L-ornithine δ-aminotransferase are unique among aminotransferases: they are specific for L-amino acids but act on the distal amino group to the prochiral carbon atom. The products, L-α-aminoadipic δ-semialdehyde and L-glutamic γ-semialdehyde, in both enzyme reactions are spontaneously converted into the intramolecularly dehydrated form. Δ^1-piperideine-6-carboxylate and Δ^1-pyrroline-5-carboxylate, respectively; the reactions are virtually irreversible. In order to obtain information on the orientation of substrates in the active sites of these enzymes, the stereochemistry of the proton abstraction by L-lysine ε-aminotransferase and L-ornithine δ-aminotransferase has been investigated. Both the ε-aminotransferases have been shown to abstract stereospecifically the pro-S hydrogen atom from the ε-amino group bearing carbon atoms of their amino donors.
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